RNA–Protein interactions for RNA: ENST00000364295.1

RNU6-1229P-201, Transcript of RNA, U6 small nuclear 1229, pseudogene, humanhuman

BASIC

Gene RNU6-1229P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1229P-201ENST00000364295 AMIGO2Q86SJ2 522 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 DTX2Q86UW9 622 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ZNF843Q8N446 348 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PRR18Q8N4B5 295 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 C8orf58Q8NAV2 365 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PSD4Q8NDX1 1056 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 KLHDC4Q8TBB5 520 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CCHCR1Q8TD31 782 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 WIPF2Q8TF74 440 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 STON2Q8WXE9 905 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SOCS4Q8WXH5 440 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TFAP2BQ92481 460 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SNX19Q92543 992 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 HDAC10Q969S8 669 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 FKBP10Q96AY3 582 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 COA7Q96BR5 231 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 FBXL20Q96IG2 436 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 VCPIP1Q96JH7 1222 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TMX3Q96JJ7 454 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 RITA1Q96K30 269 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TEKT5Q96M29 485 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 C7orf25Q9BPX7 421 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CNPPD1Q9BV87 410 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PACSIN1Q9BY11 444 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 DPH1Q9BZG8 443 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 AMBRA1Q9C0C7 1298 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PRSS22Q9GZN4 317 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 VPS16Q9H269 839 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SMOC2Q9H3U7 446 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CPNE5Q9HCH3 593 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 GJB4Q9NTQ9 266 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 GAR1Q9NY12 217 aaKnown RBP0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 DLL3Q9NYJ7 618 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 EHD3Q9NZN3 535 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ZDHHC8Q9ULC8 765 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 AGAP1Q9UPQ3 857 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CDYLQ9Y232 598 aa0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 RUVBL1Q9Y265 456 aaKnown RBP0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 MTO1Q9Y2Z2 717 aaKnown RBP0.79□□□□□ -2.28
RNU6-1229P-201ENST00000364295 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CCDC154A6NI56 674 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 DCLK1O15075 740 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 KIAA0391O15091 583 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SLC16A6O15403 523 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ORC4O43929 436 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 JTBO76095 146 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 NXPH3O95157 252 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 OAZ2O95190 189 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TUBB4AP04350 444 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CSF1RP07333 972 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CHRM2P08172 466 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ZFXP17010 805 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 VIPR2P41587 438 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PIK3CGP48736 1102 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 HK3P52790 923 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ARFIP2P53365 341 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PER3P56645 1201 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 NKX6-1P78426 367 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CFHR1Q03591 330 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ZNF844Q08AG5 666 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SNAPC2Q13487 334 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 MTMR1Q13613 665 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 IL10RAQ13651 578 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 BMPR2Q13873 1038 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 HABP2Q14520 560 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CYP1B1Q16678 543 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ATP2B3Q16720 1220 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CD300EQ496F6 205 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CCDC93Q567U6 631 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TAF7LQ5H9L4 462 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 RBM20Q5T481 1227 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TSTD2Q5T7W7 516 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 MEX3CQ5U5Q3 659 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SYDE2Q5VT97 1194 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 SUMO4Q6EEV6 95 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CEP85Q6P2H3 762 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 KIRREL2Q6UWL6 708 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 C9orf47Q6ZRZ4 202 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TSHZ1Q6ZSZ6 1077 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 MAVSQ7Z434 540 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 WDR53Q7Z5U6 358 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 YTHDF3Q7Z739 585 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 NPM2Q86SE8 214 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 UBR7Q8N806 425 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 CNTD1Q8N815 330 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 RP9Q8TA86 221 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 WDR66Q8TBY9 1149 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PNISRQ8TF01 805 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ATRIPQ8WXE1 791 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 DPF2Q92785 391 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 RAB24Q969Q5 203 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 PHACTR3Q96KR7 559 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TRIB1Q96RU8 372 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 MRPL46Q9H2W6 279 aaKnown RBP0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TCF7L1Q9HCS4 588 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 TDP1Q9NUW8 608 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 ASIC5Q9NY37 505 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 DKK3Q9UBP4 350 aa0.78□□□□□ -2.28
RNU6-1229P-201ENST00000364295 HESX1Q9UBX0 185 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms