RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PTPN1P18031 435 aaKnown RBP21.89■■□□□ 1.1
SHISA4-201ENST00000362011 SSTR3P32745 418 aaPredicted RBP21.89■■□□□ 1.1
SHISA4-201ENST00000362011 PSMC1P62191 440 aaKnown RBP21.89■■□□□ 1.1
SHISA4-201ENST00000362011 CNGA2Q16280 664 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 CCDC122Q5T0U0 273 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 C10orf76Q5T2E6 689 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 ALKBH5Q6P6C2 394 aaKnown RBP21.89■■□□□ 1.1
SHISA4-201ENST00000362011 ZSCAN30Q86W11 494 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 CEP57Q86XR8 500 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 KIAA1524Q8TCG1 905 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 CLP1Q92989 425 aaKnown RBP21.89■■□□□ 1.1
SHISA4-201ENST00000362011 PCDHB18PQ96TA0 734 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 RTP3Q9BQQ7 232 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 ZSWIM1Q9BR11 485 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 ACBD6Q9BR61 282 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 NENFQ9UMX5 172 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.89■■□□□ 1.1
SHISA4-201ENST00000362011 CEP83Q9Y592 693 aa21.89■■□□□ 1.1
SHISA4-201ENST00000362011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 LINC01553A4QN01 128 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 O00370 1275 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 OAZ2O95190 189 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 EFEMP2O95967 443 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 HOXD11P31277 338 aaPredicted RBP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 CYP27A1Q02318 531 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 CLEC16AQ2KHT3 1053 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 VARS2Q5ST30 1063 aaKnown RBP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 PPP1R26Q5T8A7 1209 aaPredicted RBP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 ARHGAP17Q68EM7 881 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 PALB2Q86YC2 1186 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 RNF168Q8IYW5 571 aaPredicted RBP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 C12orf29Q8N999 325 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 GDPD5Q8WTR4 605 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 KHSRPQ92945 711 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 HERC2P3Q9BVR0 1158 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 FAM49BQ9NUQ9 324 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 PPP2R2CQ9Y2T4 447 aa21.88■■□□□ 1.09
SHISA4-201ENST00000362011 REXO2Q9Y3B8 237 aaKnown RBP21.88■■□□□ 1.09
SHISA4-201ENST00000362011 H7C4K7 107 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 CCP110O43303 1012 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 ZSCAN12O43309 604 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 GPR37L1O60883 481 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 ATP2C2O75185 946 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 MICAL2O94851 1124 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 CYP1A1P04798 512 aaPredicted RBP21.87■■□□□ 1.09
SHISA4-201ENST00000362011 CFHP08603 1231 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 GZMAP12544 262 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 MAGEA1P43355 309 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 TSPY1Q01534 308 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 MRPL58Q14197 206 aaKnown RBP21.87■■□□□ 1.09
SHISA4-201ENST00000362011 GOLGA7BQ2TAP0 167 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 USP41Q3LFD5 358 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 INTS6LQ5JSJ4 861 aaKnown RBP21.87■■□□□ 1.09
SHISA4-201ENST00000362011 KIAA0319Q5VV43 1072 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 ZNF280DQ6N043 979 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 LCLAT1Q6UWP7 414 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 KIAA1328Q86T90 577 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 PASD1Q8IV76 773 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 TXLNBQ8N3L3 684 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 CYFIP2Q96F07 1278 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 TGS1Q96RS0 853 aaKnown RBP21.87■■□□□ 1.09
SHISA4-201ENST00000362011 LPIN3Q9BQK8 851 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 TTPALQ9BTX7 342 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 C11orf16Q9NQ32 467 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 CRTAC1Q9NQ79 661 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 TSPAN16Q9UKR8 245 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 RWDD3Q9Y3V2 267 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 PCDHA13Q9Y5I0 950 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 MYO16Q9Y6X6 1858 aa21.87■■□□□ 1.09
SHISA4-201ENST00000362011 TMCO5BA8MYB1 307 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 M0QYV0 167 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 RTN2O75298 545 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 LSM8O95777 96 aaKnown RBP21.86■■□□□ 1.09
SHISA4-201ENST00000362011 SOD2P04179 222 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 LINC00271P0C7V0 271 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 MSNP26038 577 aaKnown RBP21.86■■□□□ 1.09
SHISA4-201ENST00000362011 NOMO3P69849 1222 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 CTXN3Q4LDR2 81 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 MDH1BQ5I0G3 518 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 PPP1R2P3Q6NXS1 205 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 ANKS3Q6ZW76 656 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 TMEM35BQ8NCS4 154 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 VN1R3Q9BXE9 311 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 LHX5Q9H2C1 402 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 HESX1Q9UBX0 185 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 STK39Q9UEW8 545 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 ATP8B3O60423 1300 aa21.86■■□□□ 1.09
SHISA4-201ENST00000362011 ATG2AQ2TAZ0 1938 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 OR6C75A6NL08 312 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 UNGP13051 313 aaPredicted RBP21.85■■□□□ 1.09
SHISA4-201ENST00000362011 CCDC130P13994 396 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 CDH5P33151 784 aaPredicted RBP21.85■■□□□ 1.09
SHISA4-201ENST00000362011 VAV2P52735 878 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 MAPRE1Q15691 268 aaKnown RBP21.85■■□□□ 1.09
SHISA4-201ENST00000362011 TMEM31Q5JXX7 168 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 RTP2Q5QGT7 225 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 NAA35Q5VZE5 725 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 ACAD10Q6JQN1 1059 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 DENND1BQ6P3S1 775 aa21.85■■□□□ 1.09
SHISA4-201ENST00000362011 TAS1R1Q7RTX1 841 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms