RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FAM86B2P0C5J1 330 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 FAM228BP0C875 321 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 MAGEA4P43358 317 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 ZDHHC17Q8IUH5 632 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 TAS1R2Q8TE23 839 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 RPRD1AQ96P16 312 aaPredicted RBP14.05□□□□□ -0.16
LDB3-202ENST00000361373 YME1L1Q96TA2 773 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 TRIM51Q9BSJ1 452 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 KCNF1Q9H3M0 494 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 SUDS3Q9H7L9 328 aaPredicted RBP14.05□□□□□ -0.16
LDB3-202ENST00000361373 RBM12Q9NTZ6 932 aaKnown RBP14.05□□□□□ -0.16
LDB3-202ENST00000361373 AAR2Q9Y312 384 aaKnown RBP14.05□□□□□ -0.16
LDB3-202ENST00000361373 PKP3Q9Y446 797 aa14.05□□□□□ -0.16
LDB3-202ENST00000361373 HMOX2P30519 316 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 GCNT1Q02742 428 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 EPC2Q52LR7 807 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 GPR63Q9BZJ6 419 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 HMX1Q9NP08 348 aaPredicted RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 AFF4Q9UHB7 1163 aaKnown RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 RFC1P35251 1148 aaPredicted RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 VGLL4Q14135 290 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 POLD3Q15054 466 aaPredicted RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 LY6KQ17RY6 165 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 ANKS3Q6ZW76 656 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 PRUNE1Q86TP1 453 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 ITIH5Q86UX2 942 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 CINPQ9BW66 212 aaPredicted RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 F8VZ95 297 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 SGPL1O95470 568 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 AARSP49588 968 aaKnown RBP eCLIP14.04□□□□□ -0.16
LDB3-202ENST00000361373 PSEN2P49810 448 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 RBBP7Q16576 425 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 NLRP14Q86W24 1093 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 VCPIP1Q96JH7 1222 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 KRT82Q9NSB4 513 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 INTS13Q9NVM9 706 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 BARX2Q9UMQ3 279 aaPredicted RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 SLC15A5A6NIM6 579 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 IRF1P10914 325 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 EPHB3P54753 998 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 CAPRIN1Q14444 709 aaKnown RBP14.04□□□□□ -0.16
LDB3-202ENST00000361373 DDIASQ8IXT1 998 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 RNF217Q8TC41 542 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 LATS2Q9NRM7 1088 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 DCTN4Q9UJW0 460 aa14.04□□□□□ -0.16
LDB3-202ENST00000361373 H0Y626 953 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 NCAM2O15394 837 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 PAX3P23760 479 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 YY1P25490 414 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
LDB3-202ENST00000361373 SEZ6Q53EL9 994 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 MAF1Q9H063 256 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 C20orf96Q9NUD7 363 aaPredicted RBP14.03□□□□□ -0.16
LDB3-202ENST00000361373 DISP2A7MBM2 1401 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 ATMINO43313 823 aaPredicted RBP14.03□□□□□ -0.16
LDB3-202ENST00000361373 MYL6P60660 151 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 NT5DC1Q5TFE4 455 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 PTRHD1Q6GMV3 140 aaKnown RBP14.03□□□□□ -0.16
LDB3-202ENST00000361373 SLFN11Q7Z7L1 901 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 BRSK2Q8IWQ3 736 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 IPMKQ8NFU5 416 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 C9orf72Q96LT7 481 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 FBXO44Q9H4M3 255 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 GRID1Q9ULK0 1009 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 TFDP3Q5H9I0 405 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 AARS2Q5JTZ9 985 aaKnown RBP14.03□□□□□ -0.16
LDB3-202ENST00000361373 STOML1Q9UBI4 398 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 PLA2G6O60733 806 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 E2F6O75461 281 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 APOA4P06727 396 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 FSCN1Q16658 493 aaKnown RBP14.03□□□□□ -0.16
LDB3-202ENST00000361373 TTLL9Q3SXZ7 439 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 C3orf62Q6ZUJ4 267 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 STAMBPL1Q96FJ0 436 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 TBCBQ99426 244 aa14.03□□□□□ -0.16
LDB3-202ENST00000361373 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 FAM47DPA6NHR8 397 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 STX7O15400 261 aaKnown RBP14.02□□□□□ -0.16
LDB3-202ENST00000361373 RAD51CO43502 376 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 PROSCO94903 275 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 KRT16P08779 473 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 ZNF286BP0CG31 522 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 STX3Q13277 289 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 TERF2Q15554 542 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 SMTNL2Q2TAL5 461 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 UGT3A1Q6NUS8 523 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 EXD1Q8NHP7 514 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 SLC26A7Q8TE54 656 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 PNMA5Q96PV4 448 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 TMEM134Q9H6X4 195 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 TRPV2Q9Y5S1 764 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 CFAP73A6NFT4 308 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 KITP10721 976 aa14.02□□□□□ -0.16
LDB3-202ENST00000361373 HDAC4P56524 1084 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms