RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 CEP104O60308 925 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 AARSP49588 968 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC197-201ENST00000359253 RWDD2BP57060 319 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 SLC8A3P57103 927 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 GPNMBQ14956 572 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 UPP1Q16831 310 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 PKDCCQ504Y2 493 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 PPP1R15BQ5SWA1 713 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 LRRC38Q5VT99 294 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 DCUN1D2Q6PH85 259 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 DCLRE1AQ6PJP8 1040 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 PDCL2Q8N4E4 241 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 NIPA2Q8N8Q9 360 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 ANKRD52Q8NB46 1076 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 URGCPQ8TCY9 931 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 KBTBD7Q8WVZ9 684 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 MAIP1Q8WWC4 291 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 HERVK_113Q902F9 699 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 SEPT8Q92599 483 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 SENP8Q96LD8 212 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 SYNCQ9H7C4 482 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM59LQ9UK28 342 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 TSPAN16Q9UKR8 245 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 PACSIN2Q9UNF0 486 aaPredicted RBP14.26□□□□□ -0.13
CCDC197-201ENST00000359253 COLQQ9Y215 455 aaPredicted RBP14.26□□□□□ -0.13
CCDC197-201ENST00000359253 CEP290O15078 2479 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 ABHD14A-ACY1A0A1B0GW23 586 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 PDE2AO00408 941 aaPredicted RBP14.25□□□□□ -0.13
CCDC197-201ENST00000359253 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
CCDC197-201ENST00000359253 HOXA2O43364 376 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 BAIAP3O94812 1187 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 ODC1P11926 461 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 DESP17661 470 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 SCNN1AP37088 669 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 CETN2P41208 172 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 ACADSBP45954 432 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 PEX5P50542 639 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 SCNN1GP51170 649 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 BCAT1P54687 386 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 PDCLQ13371 301 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 BRD3Q15059 726 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 SEL1L2Q5TEA6 688 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 WDR93Q6P2C0 686 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 DSTYKQ6XUX3 929 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 ZNF365Q70YC5 407 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 METTL23Q86XA0 190 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 RHOT1Q8IXI2 618 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 LPPQ93052 612 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 SCLYQ96I15 445 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 HSFY1Q96LI6 401 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 PSMB7Q99436 277 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 MIOSQ9NXC5 875 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 HMGXB4Q9UGU5 601 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 RAB21Q9UL25 225 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 L1RE1Q9UN81 338 aa14.25□□□□□ -0.13
CCDC197-201ENST00000359253 GOLGA6L10A0A0M3HER8 536 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM189-UBE2V1I3L0A0 370 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 NBNO60934 754 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 ERLIN1O75477 346 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 CYP11A1P05108 521 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 KRT3P12035 628 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 PCSK1P29120 753 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 RPL34P49207 117 aaKnown RBP14.24□□□□□ -0.13
CCDC197-201ENST00000359253 CLCNKBP51801 687 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 PSMC1P62191 440 aaKnown RBP14.24□□□□□ -0.13
CCDC197-201ENST00000359253 BST2Q10589 180 aaKnown RBP14.24□□□□□ -0.13
CCDC197-201ENST00000359253 IKBKEQ14164 716 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 MBTPS1Q14703 1052 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 SHHQ15465 462 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 GOLGA7BQ2TAP0 167 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 LRIT3Q3SXY7 679 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 PTPN20Q4JDL3 420 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 CNKSR3Q6P9H4 555 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM110Q86TL2 294 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 PHOSPHO2Q8TCD6 241 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 SLC35F5Q8WV83 523 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 VWCEQ96DN2 955 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 MCRS1Q96EZ8 462 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 RUNDC3BQ96NL0 473 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 HNRNPABQ99729 332 aaKnown RBP14.24□□□□□ -0.13
CCDC197-201ENST00000359253 SLC4A5Q9BY07 1137 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 GOLPH3Q9H4A6 298 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 GOLGA2P5Q9HBQ8 144 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC197-201ENST00000359253 V9GYY5 206 aaPredicted RBP14.24□□□□□ -0.13
CCDC197-201ENST00000359253 SCN1AP35498 2009 aa14.24□□□□□ -0.13
CCDC197-201ENST00000359253 CCDC151A5D8V7 595 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 MEIS3P2A8K0S8 358 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM110-MUSTN1A8MSY1 372 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 M0QZQ0 153 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 H2AFXP16104 143 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms