RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 NR1H3Q13133 447 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 BEST2Q8NFU1 509 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 CCDC110Q8TBZ0 833 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
SSU72-202ENST00000359060 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 CDT1Q9H211 546 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 DPP3Q9NY33 737 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 PMM2O15305 246 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
SSU72-202ENST00000359060 WNT7BP56706 349 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 MCL1Q07820 350 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 EXOC3L1Q86VI1 746 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.53
SSU72-202ENST00000359060 TMEM176AQ96HP8 235 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 RILPQ96NA2 401 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 GCOM2Q9BZD3 368 aaPredicted RBP11.74□□□□□ -0.53
SSU72-202ENST00000359060 SLC40A1Q9NP59 571 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 KLK14Q9P0G3 267 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 TULP2O00295 520 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 ATP4AP20648 1035 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 GPD1P21695 349 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 GOLGA7BQ2TAP0 167 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 ARMCX2Q7L311 632 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 KIF2BQ8N4N8 673 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 DDX1Q92499 740 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 SLITRK1Q96PX8 696 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 SYT11Q9BT88 431 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 KLC2Q9H0B6 622 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 ECT2Q9H8V3 914 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 H0YGN5 161 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 DNALI1O14645 258 aaPredicted RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 GCLCP48506 637 aaPredicted RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 NDST1P52848 882 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 SARNPP82979 210 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 TWF2Q6IBS0 349 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 C3orf20Q8ND61 904 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 RXFP2Q8WXD0 754 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 MCUR1Q96AQ8 359 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 ZBED3Q96IU2 234 aaPredicted RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 USP18Q9UMW8 372 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 ARL2BPQ9Y2Y0 163 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 NFS1Q9Y697 457 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 LY75O60449 1722 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 H3BRB1 525 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 M0QZ92 97 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 XPOTO43592 962 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 BANF1O75531 89 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 CREB1P16220 341 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 SSTR1P30872 391 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 SCTRP47872 440 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 MAP3K10Q02779 954 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 PLEKHA7Q6IQ23 1121 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 JOSD2Q8TAC2 188 aa11.73□□□□□ -0.53
SSU72-202ENST00000359060 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 TUT1Q9H6E5 874 aaKnown RBP11.73□□□□□ -0.53
SSU72-202ENST00000359060 TMEM191CA6NGB0 347 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 FZD9O00144 591 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 CYP1A1P04798 512 aaPredicted RBP11.72□□□□□ -0.53
SSU72-202ENST00000359060 TCF4P15884 667 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 EIF4BP23588 611 aaKnown RBP11.72□□□□□ -0.53
SSU72-202ENST00000359060 ZRSR2Q15696 482 aaKnown RBP11.72□□□□□ -0.53
SSU72-202ENST00000359060 KLHL38Q2WGJ6 581 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 C9orf131Q5VYM1 1079 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 GPR20Q99678 358 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 SLC13A1Q9BZW2 595 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 MROH8Q9H579 483 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 ETNK1Q9HBU6 452 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 PSMC3IPQ9P2W1 217 aaPredicted RBP11.72□□□□□ -0.53
SSU72-202ENST00000359060 SLC12A6Q9UHW9 1150 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 ZNF831Q5JPB2 1677 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 CCL15-CCL14A0A0B4J2E2 113 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 IQANK1A0A1B0GTG1 560 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 CXCL11O14625 94 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 LIASO43766 372 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 MYL3P08590 195 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 KRT4P19013 534 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 MIPP30301 263 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 ADCYAP1R1P41586 468 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 POU5F1Q01860 360 aaKnown RBP11.72□□□□□ -0.53
SSU72-202ENST00000359060 CCL15Q16663 113 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 PPIL6Q8IXY8 311 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 RSAD1Q9HA92 442 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 CREB3O43889 395 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 MICAL2O94851 1124 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 ICAM3P32942 547 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 SLC26A2P50443 739 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 NAA25Q14CX7 972 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 CNGA2Q16280 664 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms