RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ITKQ08881 620 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 LAMTOR4Q0VGL1 99 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 AP1B1Q10567 949 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 ZACNQ401N2 412 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 GLRA4Q5JXX5 417 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 ABCF3Q9NUQ8 709 aa12.83□□□□□ -0.36
COL20A1-201ENST00000358894 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 TAS2R40P59535 323 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 HACE1Q8IYU2 909 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 BEST2Q8NFU1 509 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 HELQQ8TDG4 1101 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 CYP39A1Q9NYL5 469 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 POLIQ9UNA4 740 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 R3HDM2Q9Y2K5 976 aaKnown RBP12.82□□□□□ -0.36
COL20A1-201ENST00000358894 ADCY3O60266 1144 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 PEX10O60683 326 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 TRPA1O75762 1119 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 NUDT17P0C025 328 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 GEMIN4P57678 1058 aaKnown RBP12.82□□□□□ -0.36
COL20A1-201ENST00000358894 MAMLD1Q13495 774 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 NT5C1AQ9BXI3 368 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 SLC5A4Q9NY91 659 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 DLGAP2Q9P1A6 1054 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 ZNF862O60290 1169 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 TNFSF9P41273 254 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 ITIH4Q14624 930 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 NFIL3Q16649 462 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 TWF2Q6IBS0 349 aaKnown RBP12.82□□□□□ -0.36
COL20A1-201ENST00000358894 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 FGD4Q96M96 766 aa12.82□□□□□ -0.36
COL20A1-201ENST00000358894 TBC1D12O60347 775 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 HUS1O60921 280 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 GPD1P21695 349 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 TMEM132BQ14DG7 1078 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PREPLQ4J6C6 727 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 EXOC3L1Q86VI1 746 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 WDR49Q8IV35 697 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 WDR75Q8IWA0 830 aaKnown RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 C12orf56Q8IXR9 622 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 RIBC1Q8N443 379 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 FAM111AQ96PZ2 611 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 LRRC19Q9H756 370 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PAPOLBQ9NRJ5 636 aaKnown RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 HAO1Q9UJM8 370 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 FIS1Q9Y3D6 152 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 E2F8A0AVK6 867 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 HBP1O60381 514 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 GNAT1P11488 350 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 VCPP55072 806 aaKnown RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PTK6Q13882 451 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PLCB4Q15147 1175 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CNGA2Q16280 664 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 DCAF12L1Q5VU92 463 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CLEC4DQ8WXI8 215 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CPB2Q96IY4 423 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PORCNQ9H237 461 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 KDM4CQ9H3R0 1056 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 PCMTD2Q9NV79 361 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 ZMYM2Q9UBW7 1377 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CACNA1SQ13698 1873 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 DNALI1O14645 258 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 FSCN2O14926 492 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 EDIL3O43854 480 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 FSBPO95073 299 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 VTNP04004 478 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 DRD4P21917 467 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 ADSSP30520 456 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 KDSRQ06136 332 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 MCL1Q07820 350 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 KCNV1Q6PIU1 500 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 AGR3Q8TD06 166 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 ART4Q93070 314 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 ERAP1Q9NZ08 941 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CCDC78A2IDD5 438 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 KLRG2A4D1S0 409 aaPredicted RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 MAP3K7O43318 606 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 LYPLA2O95372 231 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 HNRNPCP07910 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CHRNB2P17787 502 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 UBA1P22314 1058 aaKnown RBP12.81□□□□□ -0.36
COL20A1-201ENST00000358894 CPA2P48052 419 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 ZBTB41Q5SVQ8 909 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 TMEM154Q6P9G4 183 aa12.81□□□□□ -0.36
COL20A1-201ENST00000358894 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms