RNA–Protein interactions for RNA: ENST00000357857.14

CLN3-204, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-204ENST00000357857 PRG3Q9Y2Y8 225 aaPredicted RBP19.76■□□□□ 0.75
CLN3-204ENST00000357857 SRGAP2O75044 1071 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 SLU7O95391 586 aaKnown RBP19.75■□□□□ 0.75
CLN3-204ENST00000357857 TCP1P17987 556 aaKnown RBP19.75■□□□□ 0.75
CLN3-204ENST00000357857 TYMPP19971 482 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 PCSK1P29120 753 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 PTPROQ16827 1216 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 WHAMMP3Q1A5X7 153 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 DNAJC24Q6P3W2 148 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 ANKRD52Q8NB46 1076 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 SLC2A14Q8TDB8 520 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 IPO4Q8TEX9 1081 aaKnown RBP19.75■□□□□ 0.75
CLN3-204ENST00000357857 BTBD6Q96KE9 485 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 OSBPL9Q96SU4 736 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 CDH9Q9ULB4 789 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 ALG6Q9Y672 507 aa19.75■□□□□ 0.75
CLN3-204ENST00000357857 UPP2O95045 317 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 GABRB2P47870 512 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 BCAT1P54687 386 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 KIAA0319Q5VV43 1072 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 C3orf20Q8ND61 904 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 HNRNPABQ99729 332 aaKnown RBP19.74■□□□□ 0.75
CLN3-204ENST00000357857 WDR35Q9P2L0 1181 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 TJP2Q9UDY2 1190 aa19.74■□□□□ 0.75
CLN3-204ENST00000357857 TCRBV5S1A1TA0A578 114 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 NRP1O14786 923 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 TADA2AO75478 443 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 ERBB2P04626 1255 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 DNA2P51530 1060 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 GSCP56915 257 aaPredicted RBP19.73■□□□□ 0.75
CLN3-204ENST00000357857 PDE4CQ08493 712 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 BST2Q10589 180 aaKnown RBP19.73■□□□□ 0.75
CLN3-204ENST00000357857 MDH1BQ5I0G3 518 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 LRRC43Q8N309 656 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 FEZF2Q8TBJ5 459 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 SLC35F5Q8WV83 523 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 PSMB7Q99436 277 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 TMEM175Q9BSA9 504 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 COLEC11Q9BWP8 271 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 CARD6Q9BX69 1037 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 MIS12Q9H081 205 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 CRTAC1Q9NQ79 661 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 ST7Q9NRC1 585 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 MYO1FO00160 1098 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 TRAPPC3O43617 180 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 EFCAB14O75071 495 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 ALDH2P05091 517 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 TKTP29401 623 aaKnown RBP19.73■□□□□ 0.75
CLN3-204ENST00000357857 TERF1P54274 439 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 TAP1Q03518 808 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 ZNF268Q14587 947 aaPredicted RBP19.73■□□□□ 0.75
CLN3-204ENST00000357857 OVOS1Q6IE37 1185 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 XYLT1Q86Y38 959 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 FUKQ8N0W3 1084 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 THEM5Q8N1Q8 247 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 HES6Q96HZ4 224 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 RTP3Q9BQQ7 232 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 ACBD6Q9BR61 282 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 TRIM7Q9C029 511 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 FAN1Q9Y2M0 1017 aa19.73■□□□□ 0.75
CLN3-204ENST00000357857 VWA8A3KMH1 1905 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 ZNF185O15231 689 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 GJB6O95452 261 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 AMHP03971 560 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 COMTP21964 271 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 SLC11A1P49279 550 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 RGS7P49802 495 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 CCDC142Q17RM4 750 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 PMF1Q6P1K2 205 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 MNS1Q8NEH6 495 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 STK32AQ8WU08 396 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 UBE2Q2Q8WVN8 375 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 MED10Q9BTT4 135 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 SELENOOQ9BVL4 669 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 SLC4A5Q9BY07 1137 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 HCSTQ9UBK5 93 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 ADAM28Q9UKQ2 775 aa19.72■□□□□ 0.75
CLN3-204ENST00000357857 MYBPHLA2RUH7 354 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 E5RJQ4 531 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 GOLGA8SH3BPF8 625 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 TULP2O00295 520 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 DGKIO75912 1065 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 CXCR5P32302 372 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 SNX16P57768 344 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 PPP1R15BQ5SWA1 713 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 DCUN1D2Q6PH85 259 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 CEP112Q8N8E3 955 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 MYCBPAPQ8TBZ2 947 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 COG1Q8WTW3 980 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 TOP1MTQ969P6 601 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 CAPZA3Q96KX2 299 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 DUSP16Q9BY84 665 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 B3GNT5Q9BYG0 378 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 TMEM191CA6NGB0 347 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 SIGLEC16A6NMB1 481 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 CLDN5O00501 218 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 SPOPO43791 374 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 CAPN15O75808 1086 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 ACRP10323 421 aa19.71■□□□□ 0.75
CLN3-204ENST00000357857 RPL7AP62424 266 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms