RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 C3orf62Q6ZUJ4 267 aa18.58■□□□□ 0.56
RTN4-204ENST00000357732 WDR49Q8IV35 697 aa18.58■□□□□ 0.56
RTN4-204ENST00000357732 PDIK1LQ8N165 341 aa18.58■□□□□ 0.56
RTN4-204ENST00000357732 DEPTORQ8TB45 409 aa18.58■□□□□ 0.56
RTN4-204ENST00000357732 NSUN6Q8TEA1 469 aaKnown RBP18.58■□□□□ 0.56
RTN4-204ENST00000357732 DENND2DQ9H6A0 471 aaPredicted RBP18.58■□□□□ 0.56
RTN4-204ENST00000357732 TELO2Q9Y4R8 837 aa18.58■□□□□ 0.56
RTN4-204ENST00000357732 ZNF541Q9H0D2 1346 aa18.58■□□□□ 0.56
RTN4-204ENST00000357732 C3orf70A6NLC5 250 aaPredicted RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 HAUS5O94927 633 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 IFNB1P01574 187 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 DHRS4L1P0CG22 281 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 TCF4P15884 667 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 ADRA1DP25100 572 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 ABL2P42684 1182 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 OAZ1P54368 228 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 TFDP1Q14186 410 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 LBRQ14739 615 aaKnown RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 MAPK6Q16659 721 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 HADHQ16836 314 aaKnown RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 SGSM1Q2NKQ1 1148 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 MTDHQ86UE4 582 aaKnown RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 CCDC60Q8IWA6 550 aaPredicted RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 TCP10LQ8TDR4 215 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 DCAKDQ8WVC6 231 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 CYTH2Q99418 400 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 OSBPL1AQ9BXW6 950 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 AGTPBP1Q9UPW5 1226 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 FGFR1P11362 822 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 PTDSS1P48651 473 aaKnown RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 ACTR2P61160 394 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 AGBL3Q8NEM8 1001 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 WNK4Q96J92 1243 aa18.57■□□□□ 0.56
RTN4-204ENST00000357732 DHX33Q9H6R0 707 aaKnown RBP18.57■□□□□ 0.56
RTN4-204ENST00000357732 KLF11O14901 512 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 CLGNO14967 610 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 OGDHQ02218 1023 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 BAATQ14032 418 aaPredicted RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 ZRSR2Q15696 482 aaKnown RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 GNPTABQ3T906 1256 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 APBB1IPQ7Z5R6 666 aaPredicted RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 BRSK2Q8IWQ3 736 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 PALM2Q8IXS6 379 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 RTKN2Q8IZC4 609 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 RSAD2Q8WXG1 361 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 APBB2Q92870 758 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 PTCD3Q96EY7 689 aaKnown RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 ZBED3Q96IU2 234 aaPredicted RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 TSSK1BQ9BXA7 367 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 HAPLN2Q9GZV7 340 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 RNF146Q9NTX7 359 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 SUPT20HL2P0C7V6 817 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 PCK1P35558 622 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 ARL2P36404 184 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 OTUD4Q01804 1114 aaKnown RBP18.56■□□□□ 0.56
RTN4-204ENST00000357732 SURF1Q15526 300 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 SUPT20HL1Q3ZLR7 823 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 ZPBP2Q6X784 338 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 RHPN2Q8IUC4 686 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 ANKMY2Q8IV38 441 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 ACTL9Q8TC94 416 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 KCNV2Q8TDN2 545 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 DNAJC9Q8WXX5 260 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 NSL1Q96IY1 281 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 NIF3L1Q9GZT8 377 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 RIPK3Q9Y572 518 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 KIAA1217Q5T5P2 1943 aa18.56■□□□□ 0.56
RTN4-204ENST00000357732 PARP14Q460N5 1801 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 VWA5AO00534 786 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 ECM2O94769 699 aaPredicted RBP18.55■□□□□ 0.56
RTN4-204ENST00000357732 SSTR1P30872 391 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 VHLP40337 213 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 YWHAEP62258 255 aaKnown RBP18.55■□□□□ 0.56
RTN4-204ENST00000357732 CDK16Q00536 496 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 SLC25A11Q02978 314 aaKnown RBP18.55■□□□□ 0.56
RTN4-204ENST00000357732 SLC18A2Q05940 514 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 MTMR2Q13614 643 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 ACAP1Q15027 740 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 MTERF2Q49AM1 385 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 PLEKHG4Q58EX7 1191 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 HP1BP3Q5SSJ5 553 aaPredicted RBP18.55■□□□□ 0.56
RTN4-204ENST00000357732 CAPN12Q6ZSI9 719 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 ARHGAP24Q8N264 748 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.55■□□□□ 0.56
RTN4-204ENST00000357732 FBXO36Q8NEA4 188 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 SKA1Q96BD8 255 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 APOPT1Q96IL0 206 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 FRMD8Q9BZ67 464 aaPredicted RBP18.55■□□□□ 0.56
RTN4-204ENST00000357732 VPS33BQ9H267 617 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 RPAP3Q9H6T3 665 aaPredicted RBP18.55■□□□□ 0.56
RTN4-204ENST00000357732 SIGLEC16A6NMB1 481 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 WEE2P0C1S8 567 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 ARFIP2P53365 341 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 TGFB2P61812 414 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 OR5B17Q8NGF7 314 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 LHX5Q9H2C1 402 aa18.55■□□□□ 0.56
RTN4-204ENST00000357732 WDR35Q9P2L0 1181 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms