RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 TDP2O95551 362 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GGPS1O95749 300 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 KRT6AP02538 564 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 KRT6BP04259 564 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CALB1P05937 261 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 NUDT17P0C025 328 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 TFPIP10646 304 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 KRT6CP48668 564 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 STAT5BP51692 787 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SEC13P55735 322 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ORC2Q13416 577 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 USP17L6PQ6QN14 398 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 TMEM179Q6ZVK1 233 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 EFL1Q7Z2Z2 1120 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 RTL3Q8N8U3 475 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 BBS4Q96RK4 519 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ROGDIQ9GZN7 287 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ARMC7Q9H6L4 198 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CATSPERBQ9H7T0 1116 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PXMP2Q9NR77 195 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SPG21Q9NZD8 308 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 BTBD3Q9Y2F9 522 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PCDHA11Q9Y5I1 949 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CASKIN1Q8WXD9 1431 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PNMA6FA0A0J9YX94 578 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 TAF4O00268 1085 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CTIFO43310 598 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PMPCBO75439 489 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 MFN2O95140 757 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ATP5F1P24539 256 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CASP14P31944 242 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CLK1P49759 484 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 HNMTP50135 292 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 RPS6KA3P51812 740 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ORC1Q13415 861 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 INPP5AQ14642 412 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 KBTBD12Q3ZCT8 623 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 TEDDM1Q5T9Z0 273 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PGBD2Q6P3X8 592 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 KCTD8Q6ZWB6 473 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GET4Q7L5D6 327 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 HERC6Q8IVU3 1022 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 THUMPD3Q9BV44 507 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 RAD21L1Q9H4I0 556 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SERHL2Q9H4I8 314 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SERHLQ9NQF3 203 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 MPP6Q9NZW5 540 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PCDHB11Q9Y5F2 797 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ARHGEF10O15013 1369 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 FAM25EA8MYX2 175 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 MCIDASD6RGH6 385 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PGRMC1O00264 195 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 KPNA3O00505 521 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 LARGE1O95461 756 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 POLBP06746 335 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ODC1P11926 461 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ACOT2P49753 483 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GDI2P50395 445 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 RHOAP61586 193 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PLGLB1Q02325 96 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PLD1Q13393 1074 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 TFDP2Q14188 446 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CLCA4Q14CN2 919 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 EZH2Q15910 746 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 WDR72Q3MJ13 1102 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PPP1R2P3Q6NXS1 205 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PEG10Q86TG7 708 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 P3H2Q8IVL5 708 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GALNT4Q8N4A0 578 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 MDM1Q8TC05 714 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 OTUD7AQ8TE49 926 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ZNF483Q8TF39 744 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 STAMBPL1Q96FJ0 436 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 TBC1D10AQ9BXI6 508 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ERAP1Q9NZ08 941 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SH3D21A4FU49 640 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GTPBP1O00178 669 aaKnown RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 PSMD9O00233 223 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 AREL1O15033 823 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 MASP1P48740 699 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 FOXM1Q08050 763 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GRAPQ13588 217 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 INSCQ1MX18 579 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 USP41Q3LFD5 358 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 AP1ARQ63HQ0 302 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 EFCAB12Q6NXP0 572 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CYP4Z1Q86W10 505 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 C7orf61Q8IZ16 206 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 CACTIN-AS1Q8N1I8 211 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 LCORLQ8N3X6 602 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 ATP6V0D2Q8N8Y2 350 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 GRAPLQ8TC17 118 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SCFD2Q8WU76 684 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SGF29Q96ES7 293 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 SPATA9Q9BWV2 254 aa6.02□□□□□ -1.45
BRCA1-203ENST00000357654 OSBPL2Q9H1P3 480 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms