RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 AGAP3Q96P47 875 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 CGRRF1Q99675 332 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 FZD1Q9UP38 647 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 TIMM44O43615 452 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 CAP2P40123 477 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 PLA2G4AP47712 749 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 GEMP55040 296 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 GTF2H3Q13889 308 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 GOLGA7BQ2TAP0 167 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 FAM167BQ9BTA0 163 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 B2RBV5 119 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 FOXN3O00409 490 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 TOMM70O94826 608 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 ATICP31939 592 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 TFDP3Q5H9I0 405 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 FAM9CQ8IZT9 166 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 STX19Q8N4C7 294 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 DNAJC9Q8WXX5 260 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 DACH2Q96NX9 599 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 RUSC1Q9BVN2 902 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CELF4Q9BZC1 486 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 DCDC2Q9UHG0 476 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 EFCAB14O75071 495 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 DEAF1O75398 565 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CSPG5O95196 566 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 ACADSP16219 412 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CPT1AP50416 773 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 TAF1CQ15572 869 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CCNG2Q16589 344 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 THEMIS2Q5TEJ8 643 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CASKIN2Q8WXE0 1202 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 MTIF3Q9H2K0 278 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 ALG13Q9NP73 1137 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 CYP11B1P15538 503 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 KCNJ1P48048 391 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 SZRD1Q7Z422 152 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 SUGP1Q8IWZ8 645 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 OR2W6PQ8NHA6 318 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 EME1Q96AY2 570 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 ATG4CQ96DT6 458 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 MAGEB18Q96M61 343 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 RBBP8Q99708 897 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 E7ENQ6 273 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 SLCO1B7G3V0H7 640 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 MED24O75448 989 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 UGT3A1Q6NUS8 523 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 SLITRK1Q96PX8 696 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 TAAR1Q96RJ0 339 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 NDUFA13Q9P0J0 144 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 AURKCQ9UQB9 309 aa12.22□□□□□ -0.45
COL9A1-202ENST00000357250 AAR2Q9Y312 384 aaKnown RBP12.22□□□□□ -0.45
COL9A1-202ENST00000357250 F5H423 210 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 PROSCO94903 275 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 ST8SIA6P61647 398 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 DCAF6Q58WW2 860 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 NIPA1Q7RTP0 329 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 ZNF720Q7Z2F6 126 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 SLC51AQ86UW1 340 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 VPS37AQ8NEZ2 397 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 RIN2Q8WYP3 895 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 IL17RAQ96F46 866 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 ATXN7L3BQ96GX2 97 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 PIDD1Q9HB75 910 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 MOSPD1Q9UJG1 213 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 FAM32AQ9Y421 112 aaKnown RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 FBXO21O94952 628 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 ENO3P13929 434 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 MPZL3Q6UWV2 235 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 TAGAPQ8N103 731 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 ZNF669Q96BR6 464 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
COL9A1-202ENST00000357250 VCPIP1Q96JH7 1222 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 NEUROG2Q9H2A3 272 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 TMBIM4Q9HC24 238 aa12.21□□□□□ -0.45
COL9A1-202ENST00000357250 TRIM49D1C9J1S8 452 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 SOAT2O75908 522 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.46
COL9A1-202ENST00000357250 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 WDR49Q8IV35 697 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 ATP6V0D2Q8N8Y2 350 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 EIF1ADQ8N9N8 165 aaKnown RBP12.21□□□□□ -0.46
COL9A1-202ENST00000357250 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.46
COL9A1-202ENST00000357250 ILKAPQ9H0C8 392 aaPredicted RBP12.21□□□□□ -0.46
COL9A1-202ENST00000357250 HACL1Q9UJ83 578 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 ARHGEF9O43307 516 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 TBC1D4O60343 1298 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 PDGFRBP09619 1106 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms