RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MAFGO15525 162 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 FKBP6O75344 327 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 PDGFRBP09619 1106 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 TROAPQ12815 778 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 FASTKD5Q7L8L6 764 aaKnown RBP15.43■□□□□ 0.06
CHD4-201ENST00000357008 TFB1MQ8WVM0 346 aaKnown RBP15.43■□□□□ 0.06
CHD4-201ENST00000357008 TMEM245Q9H330 911 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 PRKAG2Q9UGJ0 569 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 ATP6V1G2O95670 118 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 GZMAP12544 262 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 TKFCQ3LXA3 575 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 CCDC60Q8IWA6 550 aaPredicted RBP15.43■□□□□ 0.06
CHD4-201ENST00000357008 ATG4AQ8WYN0 398 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 ZFYVE19Q96K21 471 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 CLTCL1P53675 1640 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 A0A0G2JLW4 131 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 PCSK7Q16549 785 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 ZBTB10Q96DT7 871 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 C17orf75Q9HAS0 396 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 TAGLN3Q9UI15 199 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 SLC24A2Q9UI40 661 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 RAB21Q9UL25 225 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 SOX13Q9UN79 622 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 TRAPPC3O43617 180 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 BRD2P25440 801 aaKnown RBP15.43■□□□□ 0.06
CHD4-201ENST00000357008 CCDC15Q0P6D6 951 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 C1orf131Q8NDD1 294 aaKnown RBP15.43■□□□□ 0.06
CHD4-201ENST00000357008 PLEKHA8Q96JA3 519 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 ECSITQ9BQ95 431 aa15.43■□□□□ 0.06
CHD4-201ENST00000357008 MAGEB2O15479 319 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
CHD4-201ENST00000357008 CUL2Q13617 745 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 ATF7IP2Q5U623 682 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 BNC2Q6ZN30 1099 aaPredicted RBP15.42■□□□□ 0.06
CHD4-201ENST00000357008 CLEC10AQ8IUN9 316 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 JADE3Q92613 823 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 FOPNLQ96NB1 174 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 KBTBD4Q9NVX7 518 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
CHD4-201ENST00000357008 BRINP3Q76B58 766 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 VPS37AQ8NEZ2 397 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 PACSIN1Q9BY11 444 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 FAM49BQ9NUQ9 324 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 CROCC2H7BZ55 1655 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 CYP4A22Q5TCH4 519 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 MTDHQ86UE4 582 aaKnown RBP15.42■□□□□ 0.06
CHD4-201ENST00000357008 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 KANSL1LA0AUZ9 987 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 CYP2C8P10632 490 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 DCAF6Q58WW2 860 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 SLC7A14Q8TBB6 771 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 KLHL4Q9C0H6 718 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
CHD4-201ENST00000357008 ADGRA2Q96PE1 1338 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 KDM6AO15550 1401 aaPredicted RBP15.42■□□□□ 0.06
CHD4-201ENST00000357008 HMGCS2P54868 508 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 DENND1BQ6P3S1 775 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 TERB1Q8NA31 727 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 UBA3Q8TBC4 463 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 TBC1D16Q8TBP0 767 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 TBX20Q9UMR3 447 aa15.42■□□□□ 0.06
CHD4-201ENST00000357008 DPYSL4O14531 572 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 TPST1O60507 370 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ENTPD3O75355 529 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SGPL1O95470 568 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 GLI1P08151 1106 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 TFDP3Q5H9I0 405 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 AGAP9Q5VTM2 703 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 TRAF7Q6Q0C0 670 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SLC25A41Q8N5S1 370 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 CCDC126Q96EE4 140 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 DDX20Q9UHI6 824 aaKnown RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 ADGRA3Q8IWK6 1321 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 FBXW4P57775 412 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 GOLGA7BQ2TAP0 167 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SYTL3Q4VX76 610 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 NAT9Q9BTE0 207 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 PCDHB8Q9UN66 801 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 RPS6KL1Q9Y6S9 549 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 V9GYQ6 96 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ZC3H4Q9UPT8 1303 aaKnown RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 TM9SF1O15321 606 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SOAT2O75908 522 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ANXA9O76027 345 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 TGM2P21980 687 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 CSTF3Q12996 717 aaKnown RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 AARS2Q5JTZ9 985 aaKnown RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 H2AFY2Q9P0M6 372 aaPredicted RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 CLPTM1O96005 669 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 GSNP06396 782 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 MUTP22033 750 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 PTPN7P35236 360 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 MTMR2Q13614 643 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 RASA2Q15283 850 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 TRMT5Q32P41 509 aaKnown RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 PTRHD1Q6GMV3 140 aaKnown RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 CCDC81Q6ZN84 652 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms