RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 E2F7Q96AV8 911 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 OXNAD1Q96HP4 312 aaPredicted RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 EPAS1Q99814 870 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 C2CD2LO14523 706 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 CCNB1P14635 433 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 SH3BGRP55822 239 aaPredicted RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 CYP4A22Q5TCH4 519 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 MROH9Q5TGP6 573 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 ZCCHC23Q6ZST2 131 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 NDNQ99608 321 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 TMEM39BQ9GZU3 492 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 LRRC42Q9Y546 428 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 ADCY3O60266 1144 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 HMGCS2P54868 508 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 C1orf228Q6PIY5 440 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 PCGF5Q86SE9 256 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 TRIML2Q8N7C3 387 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 UTP4Q969X6 686 aaKnown RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 FOXP3Q9BZS1 431 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 NGRNQ9NPE2 291 aaKnown RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 RAB6BQ9NRW1 208 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 H0YCG3 227 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 PIK3R2O00459 728 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 NPTXRO95502 500 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 APRTP07741 180 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 P4HA1P13674 534 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 ECE1P42892 770 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 CDK16Q00536 496 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 ACVR2BQ13705 512 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 Q4G0T1 1027 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 IYDQ6PHW0 289 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 FAM71AQ8IYT1 594 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 RTKN2Q8IZC4 609 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 FEZF2Q8TBJ5 459 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 ACTL9Q8TC94 416 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 SEMA4DQ92854 862 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 PACSIN3Q9UKS6 424 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 PAIP2BQ9ULR5 123 aaKnown RBP13.11□□□□□ -0.31
BDNF-202ENST00000356660 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 P4HA2O15460 535 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 PSAPP07602 524 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 RBP3P10745 1247 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 CCND2P30279 289 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 BMT2Q1RMZ1 405 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 DNAL1Q4LDG9 190 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 APLFQ8IW19 511 aaPredicted RBP13.11□□□□□ -0.31
BDNF-202ENST00000356660 MPP4Q96JB8 637 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 NMUR2Q9GZQ4 415 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 CYP1A2P05177 515 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 OTUD4Q01804 1114 aaKnown RBP13.11□□□□□ -0.31
BDNF-202ENST00000356660 CCDC15Q0P6D6 951 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 STX3Q13277 289 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 CNGA3Q16281 694 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
BDNF-202ENST00000356660 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 DEPDC1BQ8WUY9 529 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 MIS12Q9H081 205 aa13.11□□□□□ -0.31
BDNF-202ENST00000356660 MMADHCQ9H3L0 296 aaPredicted RBP13.11□□□□□ -0.31
BDNF-202ENST00000356660 ADRB2P07550 413 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ALADP13716 330 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 AMPD1P23109 780 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SEPT6Q14141 434 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
BDNF-202ENST00000356660 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 OR6B2Q6IFH4 312 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 RIPOR1Q6ZS17 1223 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 TMPRSS6Q8IU80 811 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 TMEM35BQ8NCS4 154 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 ATXN7L3BQ96GX2 97 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 MECRQ9BV79 373 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 TAS2R1Q9NYW7 299 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 SLC24A2Q9UI40 661 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 FRMPD4Q14CM0 1322 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 A0A1B0GVG6 124 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 KRT38O76015 456 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 GM2AP17900 193 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 MORF4L2Q15014 288 aa13.1□□□□□ -0.31
BDNF-202ENST00000356660 PPP6R3Q5H9R7 873 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms