RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TRIM66O15016 1216 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 HLA-DRAP01903 254 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ITGA4P13612 1032 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF23P17027 643 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 SNRPFP62306 86 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 DCAF6Q58WW2 860 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 AGAP9Q5VTM2 703 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 COL23A1Q86Y22 540 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 RIN2Q8WYP3 895 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 TTC37Q6PGP7 1564 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 TSC22D2O75157 780 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ANXA9O76027 345 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 HARS2P49590 506 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 GPAT2Q6NUI2 795 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 MMGT1Q8N4V1 131 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 CELF1Q92879 486 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 PPP2R3CQ969Q6 453 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ZFYVE1Q9HBF4 777 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ARHGEF3Q9NR81 526 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 METP08581 1390 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 PDZK1P1A8MUH7 402 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 TRIM49D1C9J1S8 452 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 TBX3O15119 743 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 MAPK1P28482 360 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 RPS7P62081 194 aaKnown RBP15.46■□□□□ 0.06
LMX1B-201ENST00000355497 OTOAQ7RTW8 1153 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 FEZF2Q8TBJ5 459 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 CTNNAL1Q9UBT7 734 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 RNF112Q9ULX5 631 aa15.46■□□□□ 0.06
LMX1B-201ENST00000355497 RCN1Q15293 331 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 EDRF1Q3B7T1 1238 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 ERAP2Q6P179 960 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 UBA3Q8TBC4 463 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 CAPN10Q9HC96 672 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 DCDC2Q9UHG0 476 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 GLRA3O75311 464 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 AVPR1AP37288 418 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 MTMR2Q13614 643 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 CYP51A1Q16850 503 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 TTLL9Q3SXZ7 439 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 ARID3BQ8IVW6 561 aaPredicted RBP15.45■□□□□ 0.06
LMX1B-201ENST00000355497 EXTL3O43909 919 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 THRAP10827 490 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 MGAT5BQ3V5L5 792 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 ZCWPW2Q504Y3 356 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 SDE2Q6IQ49 451 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 LRRC8DQ7L1W4 858 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 JADE3Q92613 823 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 ADAM30Q9UKF2 790 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 PHTF1Q9UMS5 762 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 PSMC3P17980 439 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 PCSK1P29120 753 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 GTF2H1P32780 548 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 SERPINB5P36952 375 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 HMGCS2P54868 508 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 CDC16Q13042 620 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 ATF7IP2Q5U623 682 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 IER5Q5VY09 327 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 PNMA8BQ9ULN7 279 aaPredicted RBP15.45■□□□□ 0.06
LMX1B-201ENST00000355497 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
LMX1B-201ENST00000355497 GH1P01241 217 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CTSHP09668 335 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 FXR1P51114 621 aaKnown RBP eCLIP15.44■□□□□ 0.06
LMX1B-201ENST00000355497 IRAK1P51617 712 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 SEC24CP53992 1094 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 LAMC2Q13753 1193 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CYP4Z1Q86W10 505 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CHSY1Q86X52 802 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 TMCC3Q9ULS5 477 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 E7ENQ6 273 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 SNAP23O00161 211 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 P4HA2O15460 535 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 MAGEB2O15479 319 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 TPST1O60507 370 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 ALDH1A2O94788 518 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 RBP3P10745 1247 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 GEMP55040 296 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 TRIM25Q14258 630 aaKnown RBP15.44■□□□□ 0.06
LMX1B-201ENST00000355497 SLC29A2Q14542 456 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 ITIH4Q14624 930 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CLEC16AQ2KHT3 1053 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 UNC45BQ8IWX7 931 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 FAM111AQ96PZ2 611 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 NDUFA13Q9P0J0 144 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 ALG6Q9Y672 507 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 FYNP06241 537 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CTCFP49711 727 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-201ENST00000355497 SERPINB8P50452 374 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CHRNB3Q05901 458 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 ZNF333Q96JL9 665 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 NPHP4O75161 1426 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-201ENST00000355497 TFE3P19532 575 aaPredicted RBP15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CSE1LP55060 971 aaKnown RBP15.44■□□□□ 0.06
LMX1B-201ENST00000355497 DNAJC3Q13217 504 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 NCF4Q15080 339 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 ALFQ53S48 1182 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 SEPT12Q8IYM1 358 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 CCDC126Q96EE4 140 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms