RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 BBS4Q96RK4 519 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 EYA1Q99502 592 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 RAD21L1Q9H4I0 556 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 SH3BP4Q9P0V3 963 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 A0A0B4J269 797 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 KMOO15229 486 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 VPS26AO75436 327 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 HSPA9P38646 679 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 HUNKP57058 714 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 GPC5P78333 572 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 TRAP1Q12931 704 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 TUBB3Q13509 450 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 DEFB128Q7Z7B8 93 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 KIRREL3Q8IZU9 778 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 XXYLT1Q8NBI6 393 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 ARFIP2P53365 341 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 CYLC2Q14093 348 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 RMND5AQ9H871 391 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 TBC1D23Q9NUY8 699 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 SRP72O76094 671 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 HAUS5O94927 633 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 ADD1P35611 737 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 ELOAQ14241 798 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 MGAT4AQ9UM21 535 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 STX7O15400 261 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ENDOD1O94919 500 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 EPN2O95208 641 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 IGF1RP08069 1367 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 HSD3B1P14060 373 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NR1D1P20393 614 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SFNP31947 248 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NESP48681 1621 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 KLHL17Q6TDP4 642 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 CENPLQ8N0S6 344 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ATP6V0D2Q8N8Y2 350 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 F5H5T6 163 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SOAT2O75908 522 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 CPSF4O95639 269 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 GYS1P13807 737 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NNTQ13423 1086 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 FNDC3BQ53EP0 1204 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 DHRS1Q96LJ7 313 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 GAS2L1Q99501 681 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 TINF2Q9BSI4 451 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 CHKBQ9Y259 395 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SYNJ1O43426 1573 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SASH1O94885 1247 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 DCAF6Q58WW2 860 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NOP53Q9NZM5 478 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ABCB1P08183 1280 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 DGKDQ16760 1214 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF658Q5TYW1 1059 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 IKBIPQ70UQ0 350 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 FOXP4Q8IVH2 680 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 DSELQ8IZU8 1212 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF655Q8N720 491 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SNX21Q969T3 373 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ODC1P11926 461 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 PLCG1P19174 1290 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 PTH1RQ03431 593 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 CNDP1Q96KN2 507 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 CAB39LQ9H9S4 337 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 AHSPQ9NZD4 102 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SNX9Q9Y5X1 595 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NCF1BA6NI72 391 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NCF1CA8MVU1 366 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 FAM220BPB1ANY3 271 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ENO1P06733 434 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NCF1P14598 390 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 NFKB1P19838 968 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 MSH3P20585 1137 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 CACNB3P54284 484 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 GABPB1Q06547 395 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 SGSM1Q2NKQ1 1148 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 RABGAP1LQ5R372 815 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 TRIQKQ629K1 86 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 C16orf89Q6UX73 402 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF354BQ96LW1 612 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 PANX2Q96RD6 677 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 TRIM2Q9C040 744 aa11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF624Q9P2J8 865 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 DIS3Q9Y2L1 958 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-202ENST00000355451 C4orf46Q504U0 113 aa11.93□□□□□ -0.5
NUDCD3-202ENST00000355451 JAMLQ86YT9 394 aa11.93□□□□□ -0.5
NUDCD3-202ENST00000355451 BLOC1S5Q8TDH9 187 aa11.93□□□□□ -0.5
NUDCD3-202ENST00000355451 TGS1Q96RS0 853 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-202ENST00000355451 BHLHE41Q9C0J9 482 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-202ENST00000355451 E2F8A0AVK6 867 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms