RNA–Protein interactions for RNA: ENST00000355233.9

PTPRD-201, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-201ENST00000355233 PRELPP51888 382 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SKP1P63208 163 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PWP2Q15269 919 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 XKR9Q5GH70 373 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 AGAP9Q5VTM2 703 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 HEATR6Q6AI08 1181 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 RWDD4Q6NW29 188 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TRIM59Q8IWR1 403 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SRBD1Q8N5C6 995 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 RTL3Q8N8U3 475 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 RIBC2Q9H4K1 309 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SEC14L4Q9UDX3 406 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 DMTF1Q9Y222 760 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 RNF103-CHMP3A0A140T963 221 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PRMT5O14744 637 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PALMO75781 387 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 WDR47O94967 919 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 EYA4O95677 639 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 NR3C1P04150 777 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 VIL1P09327 827 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CYP2C18P33260 490 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 AIF1P55008 147 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 NR1H2P55055 460 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PTPRNQ16849 979 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 GET4Q7L5D6 327 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ZNF564Q8TBZ8 553 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PI4K2BQ8TCG2 481 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 NSUN6Q8TEA1 469 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ATP8B4Q8TF62 1192 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PDCD6IPQ8WUM4 868 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 BTBD9Q96Q07 612 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TRABDQ9H4I3 376 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 NOD2Q9HC29 1040 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CROTQ9UKG9 612 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PSMD12O00232 456 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 MPZL2O60487 215 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SRP72O76094 671 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PPIBP23284 216 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PTPN12Q05209 780 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 STXBP2Q15833 593 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 NAA35Q5VZE5 725 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 FAM45BPQ6NSW5 357 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 VPS11Q9H270 941 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 COG4Q9H9E3 785 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 RPF1Q9H9Y2 349 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PLGRKTQ9HBL7 147 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 KRT82Q9NSB4 513 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 APEX2Q9UBZ4 518 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TAGLN3Q9UI15 199 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 MINPP1Q9UNW1 487 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PRG3Q9Y2Y8 225 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TSC22D4Q9Y3Q8 395 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SNX9Q9Y5X1 595 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CICQ96RK0 1608 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ARFGEF2Q9Y6D5 1785 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PRR23D1E9PI22 279 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CAMTA2O94983 1202 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PRR23D2P0DMB1 279 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 C7P10643 843 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CES1P23141 567 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TAF1CQ15572 869 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 FAM83EQ2M2I3 478 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TTLL9Q3SXZ7 439 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TNFAIP8L3Q5GJ75 292 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 FAM47AQ5JRC9 791 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SAMD4BQ5PRF9 694 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 FAM83BQ5T0W9 1011 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CHST3Q7LGC8 479 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 HAUS6Q7Z4H7 955 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ZFAND2BQ8WV99 257 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 FCGR1BQ92637 280 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TOP1MTQ969P6 601 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 EME1Q96AY2 570 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 B3GALT6Q96L58 329 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TRERF1Q96PN7 1200 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ZNF184Q99676 751 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 AAR2Q9Y312 384 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 KBTBD13C9JR72 458 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 KPNA3O00505 521 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TRAFD1O14545 582 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 HNRNPDLO14979 420 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CLPTM1O96005 669 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 CD4P01730 458 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 SERPINH1P50454 418 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TSNQ15631 228 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 NIPA1Q7RTP0 329 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 FAM151AQ8WW52 585 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 WRNIP1Q96S55 665 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 OSBPL11Q9BXB4 747 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 MRPL4Q9BYD3 311 aaKnown RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ILKAPQ9H0C8 392 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-201ENST00000355233 ACAD9Q9H845 621 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TMBIM4Q9HC24 238 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 TMEM216Q9P0N5 145 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 GTF3C4Q9UKN8 822 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 RAB26Q9ULW5 256 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 PCDHB2Q9Y5E7 798 aa5.11□□□□□ -1.59
PTPRD-201ENST00000355233 MYL2P10916 166 aa5.1□□□□□ -1.59
PTPRD-201ENST00000355233 PSMA2P25787 234 aa5.1□□□□□ -1.59
PTPRD-201ENST00000355233 STAT3P40763 770 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms