RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 GRK4P32298 578 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 ZNF211Q13398 564 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 PTPROQ16827 1216 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 PPP1R26Q5T8A7 1209 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 TTC30AQ86WT1 665 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 ANKRD52Q8NB46 1076 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 APPL2Q8NEU8 664 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 ZNF296Q8WUU4 475 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 MCEEQ96PE7 176 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 THP07101 528 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 KRT3P12035 628 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 GBP1P32455 592 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 PCK1P35558 622 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 CASP8Q14790 479 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 GOLGA7BQ2TAP0 167 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 C2CD6Q53TS8 623 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 DRICH1Q6PGQ1 229 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 SYDE1Q6ZW31 735 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 RBM41Q96IZ5 413 aaKnown RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 NCAPGQ9BPX3 1015 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 APOL6Q9BWW8 343 aa18.17■□□□□ 0.5
VPS13B-201ENST00000355155 TSPYL2Q9H2G4 693 aaPredicted RBP18.17■□□□□ 0.5
VPS13B-201ENST00000355155 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 ARL5CA6NH57 179 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 ARVCFO00192 962 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 COL6A1P12109 1028 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 CKBP12277 381 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 PSMC1P62191 440 aaKnown RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 SLC25A11Q02978 314 aaKnown RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 DUPD1Q68J44 220 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 VSIG1Q86XK7 387 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 IPO4Q8TEX9 1081 aaKnown RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 HNRNPABQ99729 332 aaKnown RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 DDX47Q9H0S4 455 aaKnown RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 FAM114A2Q9NRY5 505 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 CYP11A1P05108 521 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 CD52P31358 61 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 GNL1P36915 607 aaPredicted RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 SLC7A5Q01650 507 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 SPDYCQ5MJ68 293 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 ZNF618Q5T7W0 954 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 TNIP3Q96KP6 325 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 HSFY1Q96LI6 401 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 RAB17Q9H0T7 212 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
VPS13B-201ENST00000355155 MIOSQ9NXC5 875 aa18.16■□□□□ 0.5
VPS13B-201ENST00000355155 PODXLO00592 558 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 EOMESO95936 686 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 RARAP10276 462 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 BCAT1P54687 386 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 GRIK3Q13003 919 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 AADACL2Q6P093 401 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 KLHL7Q8IXQ5 586 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 ADGRF2Q8IZF7 708 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 KRT222Q8N1A0 295 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 OSBPL7Q9BZF2 842 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 EPB41L5Q9HCM4 733 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 ACADSBP45954 432 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 RNASE9P60153 205 aaKnown RBP18.15■□□□□ 0.5
VPS13B-201ENST00000355155 BST2Q10589 180 aaKnown RBP18.15■□□□□ 0.5
VPS13B-201ENST00000355155 UPP1Q16831 310 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 OLFML1Q6UWY5 402 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 OSTM1Q86WC4 334 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 ECHDC2Q86YB7 292 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 ARFGAP1Q8N6T3 406 aa18.15■□□□□ 0.5
VPS13B-201ENST00000355155 PAK6Q9NQU5 681 aaPredicted RBP18.15■□□□□ 0.5
VPS13B-201ENST00000355155 C2CD4BA6NLJ0 364 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 DNM1LO00429 736 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 HUS1O60921 280 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 CTSHP09668 335 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 RFC1P35251 1148 aaPredicted RBP18.14■□□□□ 0.5
VPS13B-201ENST00000355155 COILP38432 576 aaPredicted RBP18.14■□□□□ 0.5
VPS13B-201ENST00000355155 ZNF143P52747 638 aaPredicted RBP18.14■□□□□ 0.5
VPS13B-201ENST00000355155 GUCY2DQ02846 1103 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 CYP4A22Q5TCH4 519 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 DCUN1D2Q6PH85 259 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 ACOT1Q86TX2 421 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.5
VPS13B-201ENST00000355155 KCTD13Q8WZ19 329 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 PKNOX2Q96KN3 472 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 FRMD8P1Q9BZ68 369 aaPredicted RBP18.14■□□□□ 0.5
VPS13B-201ENST00000355155 SNX25Q9H3E2 840 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 RSAD1Q9HA92 442 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 TJP2Q9UDY2 1190 aa18.14■□□□□ 0.5
VPS13B-201ENST00000355155 C3orf70A6NLC5 250 aaPredicted RBP18.14■□□□□ 0.49
VPS13B-201ENST00000355155 ENDOD1O94919 500 aa18.14■□□□□ 0.49
VPS13B-201ENST00000355155 MLH1P40692 756 aa18.14■□□□□ 0.49
VPS13B-201ENST00000355155 CD300LGQ6UXG3 332 aa18.14■□□□□ 0.49
VPS13B-201ENST00000355155 JOSD2Q8TAC2 188 aa18.14■□□□□ 0.49
VPS13B-201ENST00000355155 KHSRPQ92945 711 aaKnown RBP eCLIP18.14■□□□□ 0.498e-10■■■□□ 19
VPS13B-201ENST00000355155 SLITRK1Q96PX8 696 aa18.14■□□□□ 0.49
VPS13B-201ENST00000355155 C11orf84Q9BUA3 381 aaPredicted RBP18.14■□□□□ 0.49
VPS13B-201ENST00000355155 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.49
VPS13B-201ENST00000355155 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
VPS13B-201ENST00000355155 A8MXQ7 604 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 ZNF487B1APH4 448 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 C9IYK1 514 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 GABBR2O75899 941 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 LHX1P48742 406 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms