RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SLC34A1Q06495 639 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 MTM1Q13496 603 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 ATP13A4Q4VNC1 1196 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 DALRD3Q5D0E6 543 aaKnown RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 TMEM270Q6UE05 265 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 NCCRP1Q6ZVX7 275 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 SAPCD2Q86UD0 394 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 MAP4K3Q8IVH8 894 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 APLFQ8IW19 511 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 NAT14Q8WUY8 206 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 ART4Q93070 314 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 IFT43Q96FT9 208 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 PXMP2Q9NR77 195 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 UVRAGQ9P2Y5 699 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 ASLP04424 464 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PIK3CAP42336 1068 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 CLEC16AQ2KHT3 1053 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ZNF394Q53GI3 561 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 SH3D19Q5HYK7 790 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 SCARA3Q6AZY7 606 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 C12orf56Q8IXR9 622 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 C4orf33Q8N1A6 199 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 GPD1LQ8N335 351 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 PSPC1Q8WXF1 523 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 DDX1Q92499 740 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 ZNF516Q92618 1163 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ABHD8Q96I13 439 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PLVAPQ9BX97 442 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 FAM192AQ9GZU8 254 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 AAASQ9NRG9 546 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PHTF1Q9UMS5 762 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PCDHA10Q9Y5I2 948 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 LRRIQ4A6NIV6 560 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 TBC1D12O60347 775 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 GRIN3BO60391 1043 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PEX10O60683 326 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 OAS1P00973 400 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 NR3C2P08235 984 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 KRT10P13645 584 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 CCNB1P14635 433 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ATF2P15336 505 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ATF7P17544 494 aaPredicted RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 RPS12P25398 132 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 CETN2P41208 172 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 GPC3P51654 580 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 LSAMPQ13449 338 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 CLUL1Q15846 466 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 WDR72Q3MJ13 1102 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 WDR44Q5JSH3 913 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ZBTB41Q5SVQ8 909 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 VSTM1Q6UX27 236 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 MARK2Q7KZI7 788 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 FAM83AQ86UY5 434 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 MCOLN2Q8IZK6 566 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 POLR3FQ9H1D9 316 aaPredicted RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 ASCC2Q9H1I8 757 aaPredicted RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 SLC38A10Q9HBR0 1119 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 ANAPC5Q9UJX4 755 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PCDHB4Q9Y5E5 795 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 E7ENQ6 273 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 POC1B-GALNT4F8VUJ3 575 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 WDR46O15213 610 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 ADCY3O60266 1144 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ZBED4O75132 1171 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PDE5AO76074 875 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PSMG1O95456 288 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 HLA-DRAP01903 254 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 POTEJP0CG39 1038 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 NAT1P18440 290 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 NFKBIAP25963 317 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 PSMD7P51665 324 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 JAK3P52333 1124 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 NLRP11P59045 1033 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 TAS2R40P59535 323 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 CXCL9Q07325 125 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 R3HDM1Q15032 1099 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 SEPT7Q16181 437 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 FAM182AQ5T1J6 154 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 ZNF554Q86TJ5 538 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 CCDC60Q8IWA6 550 aaPredicted RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 PIP4K2CQ8TBX8 421 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 SH3TC2Q8TF17 1288 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 CKAP2Q8WWK9 683 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 TRIM11Q96F44 468 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 FAM81BQ96LP2 452 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 GINM1Q9NU53 330 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 SH3GLB1Q9Y371 365 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 RBMX2Q9Y388 322 aaKnown RBP9.83□□□□□ -0.84
SMG6-202ENST00000354901 MROH7Q68CQ1 1323 aa9.83□□□□□ -0.84
SMG6-202ENST00000354901 C2orf71A6NGG8 1288 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 GGPS1O95749 300 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 GAS8O95995 478 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 AMPD1P23109 780 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 HPCAP84074 193 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 KRT76Q01546 638 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 PRKG1Q13976 671 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms