RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CXCL11O14625 94 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 TEX28O15482 410 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 EPN2O95208 641 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 ASNSP08243 561 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 MYZAPP0CAP1 466 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 ALAS1P13196 640 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 PPP2R2AP63151 447 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 DGKZQ13574 1117 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 RCN2Q14257 317 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 GATAD2AQ86YP4 633 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 TREML1Q86YW5 311 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 RBBP8NLQ8NC74 664 aaPredicted RBP11.36□□□□□ -0.59
SND1-201ENST00000354725 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
SND1-201ENST00000354725 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 BRI3BPQ8WY22 251 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 GATA6Q92908 595 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 BTBD7Q9P203 1132 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 TDRKHQ9Y2W6 561 aaKnown RBP11.36□□□□□ -0.59
SND1-201ENST00000354725 LRRC37A2A6NM11 1700 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 ARID2Q68CP9 1835 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 IGLV3-22A0A075B6J6 115 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 TRIM64A6NGJ6 449 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 TRIM64BA6NI03 449 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 DCDC2CA8MYV0 355 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 PIK3CDO00329 1044 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 AOC2O75106 756 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 STAM2O75886 525 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 UBOX5O94941 541 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 BPNT1O95861 308 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 NR3C1P04150 777 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 STAT3P40763 770 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 QRICH1Q2TAL8 776 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 ZDHHC24Q6UX98 284 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 PCGF5Q86SE9 256 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 SFR1Q86XK3 245 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 DDX42Q86XP3 938 aaKnown RBP eCLIP11.36□□□□□ -0.59
SND1-201ENST00000354725 ACER1Q8TDN7 264 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 CHMP6Q96FZ7 201 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
SND1-201ENST00000354725 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 FAM86B1E9PN63 330 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 CALUO43852 315 aaPredicted RBP11.36□□□□□ -0.59
SND1-201ENST00000354725 FAM86B2P0C5J1 330 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 ECE1P42892 770 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 LIN52Q52LA3 116 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 ERMARDQ5T6L9 678 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 KRT77Q7Z794 578 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 GRAMD2AQ8IUY3 354 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 PGM2Q96G03 612 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 FAM20AQ96MK3 541 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 HSD17B14Q9BPX1 270 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 FAM114A2Q9NRY5 505 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 NR2E1Q9Y466 385 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 NOX1Q9Y5S8 564 aa11.36□□□□□ -0.59
SND1-201ENST00000354725 SIP14410 1827 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 TNFRSF10BO14763 440 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 COL6A2P12110 1019 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 XRCC5P13010 732 aaKnown RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 SERPINB3P29508 390 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 CASP4P49662 377 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 ZNF157P51786 506 aaPredicted RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 BACE1P56817 501 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 ZC2HC1CQ53FD0 456 aaPredicted RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 B3GNT9Q6UX72 402 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 KLHL7Q8IXQ5 586 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 TRPC4APQ8TEL6 797 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 ATXN2LQ8WWM7 1075 aaKnown RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 IFT74Q96LB3 600 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 STK33Q9BYT3 514 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 NSRP1Q9H0G5 558 aaKnown RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
SND1-201ENST00000354725 RAB17Q9H0T7 212 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 UBL4AP11441 157 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 PTGIRP43119 386 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 MMP13P45452 471 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 ARHGAP4P98171 946 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 CRY1Q16526 586 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 DEPDC1Q5TB30 811 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 USP17L6PQ6QN14 398 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 SPATA24Q86W54 205 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 OR2W6PQ8NHA6 318 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 PPP1R14CQ8TAE6 165 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
SND1-201ENST00000354725 RFFLQ8WZ73 363 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms