RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ABI2Q9NYB9 513 aaPredicted RBP17.14■□□□□ 0.33
DDX55-202ENST00000354291 BCCIPQ9P287 314 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX55-202ENST00000354291 MMP17Q9ULZ9 603 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 SLC6A14Q9UN76 642 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 PCDHB9Q9Y5E1 797 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
DDX55-202ENST00000354291 MAST4O15021 2626 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 XPOTO43592 962 aaKnown RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 CLTAP09496 248 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
DDX55-202ENST00000354291 HMGA1P17096 107 aaKnown RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 ORC2Q13416 577 aaPredicted RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 ZNF268Q14587 947 aaPredicted RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 TRIP6Q15654 476 aaKnown RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 ZNF174Q15697 407 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 DUOXA1Q1HG43 343 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 EML3Q32P44 896 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 LMBRD2Q68DH5 695 aaPredicted RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 LRRTM3Q86VH5 581 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 EFCAB13Q8IY85 973 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 DAW1Q8N136 415 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 PGBD3Q8N328 593 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 ADAM32Q8TC27 787 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 DDX19AQ9NUU7 478 aaKnown RBP17.13■□□□□ 0.33
DDX55-202ENST00000354291 PILRBQ9UKJ0 227 aa17.13■□□□□ 0.33
DDX55-202ENST00000354291 ZNF638Q14966 1978 aaKnown RBP17.12■□□□□ 0.33
DDX55-202ENST00000354291 MUTP22033 750 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 TNFSF9P41273 254 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
DDX55-202ENST00000354291 HNRNPDQ14103 355 aaKnown RBP17.12■□□□□ 0.33
DDX55-202ENST00000354291 SDHAF4Q5VUM1 108 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 CCNI2Q6ZMN8 369 aaPredicted RBP17.12■□□□□ 0.33
DDX55-202ENST00000354291 METTL23Q86XA0 190 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 MINDY1Q8N5J2 469 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 GLIS3Q8NEA6 775 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 CEP76Q8TAP6 659 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 SPPL2BQ8TCT7 592 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 KIF2CQ99661 725 aa17.12■□□□□ 0.33
DDX55-202ENST00000354291 SH3BP5O60239 455 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 CKMP06732 381 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 CD59P13987 128 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 DPP6P42658 865 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 GPR15P49685 360 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 MCL1Q07820 350 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 ZNF77Q15935 545 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 ALLCQ8N6M5 410 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
DDX55-202ENST00000354291 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
DDX55-202ENST00000354291 HMGB4Q8WW32 186 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 SLC22A12Q96S37 553 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 HAPLN2Q9GZV7 340 aa17.11■□□□□ 0.33
DDX55-202ENST00000354291 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
DDX55-202ENST00000354291 KALRNO60229 2985 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 E9PMD0 336 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
DDX55-202ENST00000354291 KLF8O95600 359 aaPredicted RBP17.1■□□□□ 0.33
DDX55-202ENST00000354291 SERPINF2P08697 491 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 FTH1P19P0C7X4 201 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 CSH1P0DML2 217 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 CSH2P0DML3 217 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 TIE1P35590 1138 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
DDX55-202ENST00000354291 MAP7D1Q3KQU3 841 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 SPDYCQ5MJ68 293 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 SH3RF2Q8TEC5 729 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 ADAMTS14Q8WXS8 1223 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 PI4K2AQ9BTU6 479 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 RUSC1Q9BVN2 902 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
DDX55-202ENST00000354291 DSEQ9UL01 958 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
DDX55-202ENST00000354291 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 SGK1O00141 431 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 ARHGAP33O14559 1287 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 CYB561D2O14569 222 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 CYP11A1P05108 521 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 OPRD1P41143 372 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
DDX55-202ENST00000354291 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 C19orf57Q0VDD7 668 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 SMARCB1Q12824 385 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 EMC10Q5UCC4 262 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 SPATA1Q5VX52 437 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 C9orf57Q5W0N0 161 aa17.09■□□□□ 0.33
DDX55-202ENST00000354291 SFTPA1Q8IWL2 248 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms