RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 KRT76Q01546 638 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 TTLL12Q14166 644 aaPredicted RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 DACT2Q5SW24 774 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 LGSNQ5TDP6 509 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 MFSD5Q6N075 450 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 CES3Q6UWW8 571 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 PCGF5Q86SE9 256 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 CCNJLQ8IV13 435 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 ABRAQ8N0Z2 381 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 RAB3IL1Q8TBN0 382 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 ARHGEF3Q9NR81 526 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 NMRK1Q9NWW6 199 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 IRAK4Q9NWZ3 460 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 PPP1R12AO14974 1030 aaPredicted RBP18.89■□□□□ 0.62
CTSB-202ENST00000353047 TNNC2P02585 160 aa18.89■□□□□ 0.62
CTSB-202ENST00000353047 GJB1P08034 283 aa18.89■□□□□ 0.62
CTSB-202ENST00000353047 ATP6V1B1P15313 513 aa18.89■□□□□ 0.62
CTSB-202ENST00000353047 MRPS9P82933 396 aaKnown RBP18.89■□□□□ 0.62
CTSB-202ENST00000353047 CENPCQ03188 943 aa18.89■□□□□ 0.62
CTSB-202ENST00000353047 TTLL6Q8N841 843 aa18.89■□□□□ 0.62
CTSB-202ENST00000353047 TXLNGYQ9BZA5 131 aa18.89■□□□□ 0.62
CTSB-202ENST00000353047 QTRT2Q9H974 415 aaKnown RBP18.89■□□□□ 0.62
CTSB-202ENST00000353047 EDF1O60869 148 aaKnown RBP18.89■□□□□ 0.61
CTSB-202ENST00000353047 ANKS1BQ7Z6G8 1248 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 TRIM50Q86XT4 487 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 PSPC1Q8WXF1 523 aaKnown RBP18.89■□□□□ 0.61
CTSB-202ENST00000353047 SEC14L1Q92503 715 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 ABTB1Q969K4 478 aaPredicted RBP18.89■□□□□ 0.61
CTSB-202ENST00000353047 FAM49BQ9NUQ9 324 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 PARP4Q9UKK3 1724 aaKnown RBP18.89■□□□□ 0.61
CTSB-202ENST00000353047 TCRBV7S3A2A0A539 114 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 P4HA2O15460 535 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 LIASO43766 372 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 KRT37O76014 449 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 TOP3BO95985 862 aaKnown RBP18.89■□□□□ 0.61
CTSB-202ENST00000353047 VHLP40337 213 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 CACNA2D1P54289 1103 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 SATB1Q01826 763 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 EMC2Q15006 297 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 TFDP3Q5H9I0 405 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 FNBP1LQ5T0N5 605 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 UNC45BQ8IWX7 931 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 ZCCHC9Q8N567 271 aaKnown RBP18.89■□□□□ 0.61
CTSB-202ENST00000353047 PPP4R1Q8TF05 950 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 SLC5A4Q9NY91 659 aa18.89■□□□□ 0.61
CTSB-202ENST00000353047 AMHR2Q16671 573 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 KLHL38Q2WGJ6 581 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 TEX9Q8N6V9 391 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 MCPH1Q8NEM0 835 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 L3MBTL3Q96JM7 780 aaPredicted RBP18.88■□□□□ 0.61
CTSB-202ENST00000353047 RANBP17Q9H2T7 1088 aaKnown RBP18.88■□□□□ 0.61
CTSB-202ENST00000353047 KCND2Q9NZV8 630 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 POLIQ9UNA4 740 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 CST3P01034 146 aaPredicted RBP18.88■□□□□ 0.61
CTSB-202ENST00000353047 DESP17661 470 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 JAK3P52333 1124 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 ROR1Q01973 937 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
CTSB-202ENST00000353047 DCLRE1BQ9H816 532 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 CCND2P30279 289 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 BCAR1P56945 870 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 TCHHL1Q5QJ38 904 aaPredicted RBP18.88■□□□□ 0.61
CTSB-202ENST00000353047 CLNKQ7Z7G1 428 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 CEP120Q8N960 986 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 MOV10L1Q9BXT6 1211 aaKnown RBP18.88■□□□□ 0.61
CTSB-202ENST00000353047 NMUR2Q9GZQ4 415 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
CTSB-202ENST00000353047 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
CTSB-202ENST00000353047 KCNA4P22459 653 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 VCPP55072 806 aaKnown RBP18.87■□□□□ 0.61
CTSB-202ENST00000353047 RPL10AP62906 217 aaKnown RBP18.87■□□□□ 0.61
CTSB-202ENST00000353047 ZNF568Q3ZCX4 644 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 SCARA3Q6AZY7 606 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 CGB2Q6NT52 195 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 FOXR2Q6PJQ5 311 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 SYDE1Q6ZW31 735 aaPredicted RBP18.87■□□□□ 0.61
CTSB-202ENST00000353047 EXD1Q8NHP7 514 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 PDCD2LQ9BRP1 358 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 PDGFRAP16234 1089 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 IRX1P78414 480 aaPredicted RBP18.87■□□□□ 0.61
CTSB-202ENST00000353047 TRIP10Q15642 601 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 JOSD2Q8TAC2 188 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 AK5Q9Y6K8 562 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 ACTR2P61160 394 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 COG7P83436 770 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 SLC25A3Q00325 362 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 SIX1Q15475 284 aaPredicted RBP18.87■□□□□ 0.61
CTSB-202ENST00000353047 TRAPPC12Q8WVT3 735 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 EBF2Q9HAK2 575 aa18.87■□□□□ 0.61
CTSB-202ENST00000353047 ZWINTO95229 277 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 CALB1P05937 261 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 TPBGLP0DKB5 382 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 TUBP50607 506 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms