RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 STAT1P42224 750 aa8.81□□□□□ -1
CD44-205ENST00000352818 VAMP7P51809 220 aa8.81□□□□□ -1
CD44-205ENST00000352818 PEX3P56589 373 aa8.81□□□□□ -1
CD44-205ENST00000352818 BCAR1P56945 870 aa8.81□□□□□ -1
CD44-205ENST00000352818 ADCY1Q08828 1119 aa8.81□□□□□ -1
CD44-205ENST00000352818 CETN1Q12798 172 aa8.81□□□□□ -1
CD44-205ENST00000352818 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 BMS1Q14692 1282 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 RNF43Q68DV7 783 aa8.81□□□□□ -1
CD44-205ENST00000352818 IQCEQ6IPM2 695 aa8.81□□□□□ -1
CD44-205ENST00000352818 SWSAP1Q6NVH7 229 aa8.81□□□□□ -1
CD44-205ENST00000352818 METTL7BQ6UX53 244 aa8.81□□□□□ -1
CD44-205ENST00000352818 TPRG1Q6ZUI0 275 aa8.81□□□□□ -1
CD44-205ENST00000352818 CYFIP1Q7L576 1253 aa8.81□□□□□ -1
CD44-205ENST00000352818 ZNF572Q7Z3I7 529 aaPredicted RBP8.81□□□□□ -1
CD44-205ENST00000352818 VPS36Q86VN1 386 aa8.81□□□□□ -1
CD44-205ENST00000352818 LRRC43Q8N309 656 aa8.81□□□□□ -1
CD44-205ENST00000352818 TMC2Q8TDI7 906 aa8.81□□□□□ -1
CD44-205ENST00000352818 IFT74Q96LB3 600 aa8.81□□□□□ -1
CD44-205ENST00000352818 CEP89Q96ST8 783 aa8.81□□□□□ -1
CD44-205ENST00000352818 STK33Q9BYT3 514 aa8.81□□□□□ -1
CD44-205ENST00000352818 CELF4Q9BZC1 486 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 INTS2Q9H0H0 1204 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 IKZF4Q9H2S9 585 aa8.81□□□□□ -1
CD44-205ENST00000352818 DHX33Q9H6R0 707 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 ELAC1Q9H777 363 aaKnown RBP8.81□□□□□ -1
CD44-205ENST00000352818 KMT5AQ9NQR1 393 aa8.81□□□□□ -1
CD44-205ENST00000352818 ZNF302Q9NR11 478 aa8.81□□□□□ -1
CD44-205ENST00000352818 MAN1C1Q9NR34 630 aa8.81□□□□□ -1
CD44-205ENST00000352818 C1orf112Q9NSG2 853 aa8.81□□□□□ -1
CD44-205ENST00000352818 ARGLU1Q9NWB6 273 aaPredicted RBP8.81□□□□□ -1
CD44-205ENST00000352818 APEX2Q9UBZ4 518 aa8.81□□□□□ -1
CD44-205ENST00000352818 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.81□□□□□ -1
CD44-205ENST00000352818 SEPT9Q9UHD8 586 aaPredicted RBP8.81□□□□□ -1
CD44-205ENST00000352818 SAR1BQ9Y6B6 198 aa8.81□□□□□ -1
CD44-205ENST00000352818 V9GYY5 206 aaPredicted RBP8.81□□□□□ -1
CD44-205ENST00000352818 NBPF19A0A087WUL8 3843 aa8.81□□□□□ -1
CD44-205ENST00000352818 SPTAN1Q13813 2472 aaKnown RBP8.8□□□□□ -1
CD44-205ENST00000352818 ABCA12Q86UK0 2595 aa8.8□□□□□ -1
CD44-205ENST00000352818 RALGAPA1Q6GYQ0 2036 aa8.8□□□□□ -1
CD44-205ENST00000352818 DENND3A2RUS2 1198 aa8.8□□□□□ -1
CD44-205ENST00000352818 FAM221BA6H8Z2 402 aa8.8□□□□□ -1
CD44-205ENST00000352818 C4orf47A7E2U8 309 aa8.8□□□□□ -1
CD44-205ENST00000352818 F8VZ95 297 aa8.8□□□□□ -1
CD44-205ENST00000352818 NOP56O00567 594 aaKnown RBP8.8□□□□□ -1
CD44-205ENST00000352818 GAS2O43903 313 aaKnown RBP8.8□□□□□ -1
CD44-205ENST00000352818 EPN2O95208 641 aa8.8□□□□□ -1
CD44-205ENST00000352818 ATP1A1P05023 1023 aaKnown RBP8.8□□□□□ -1
CD44-205ENST00000352818 TUBBP07437 444 aa8.8□□□□□ -1
CD44-205ENST00000352818 MARK3P27448 753 aa8.8□□□□□ -1
CD44-205ENST00000352818 GTF2H1P32780 548 aa8.8□□□□□ -1
CD44-205ENST00000352818 SOX5P35711 763 aa8.8□□□□□ -1
CD44-205ENST00000352818 RAP1GAPP47736 663 aa8.8□□□□□ -1
CD44-205ENST00000352818 APBA1Q02410 837 aa8.8□□□□□ -1
CD44-205ENST00000352818 GFPT1Q06210 699 aaPredicted RBP8.8□□□□□ -1
CD44-205ENST00000352818 EMC2Q15006 297 aa8.8□□□□□ -1
CD44-205ENST00000352818 TARBP2Q15633 366 aaKnown RBP8.8□□□□□ -1
CD44-205ENST00000352818 NAB2Q15742 525 aa8.8□□□□□ -1
CD44-205ENST00000352818 CBWD6Q4V339 395 aa8.8□□□□□ -1
CD44-205ENST00000352818 CBWD3Q5JTY5 395 aa8.8□□□□□ -1
CD44-205ENST00000352818 CBWD5Q5RIA9 395 aa8.8□□□□□ -1
CD44-205ENST00000352818 C1orf220Q5T0J3 134 aa8.8□□□□□ -1
CD44-205ENST00000352818 IER5Q5VY09 327 aa8.8□□□□□ -1
CD44-205ENST00000352818 FAM160B1Q5W0V3 765 aa8.8□□□□□ -1
CD44-205ENST00000352818 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
CD44-205ENST00000352818 FBXO38Q6PIJ6 1188 aa8.8□□□□□ -1
CD44-205ENST00000352818 GET4Q7L5D6 327 aaPredicted RBP8.8□□□□□ -1
CD44-205ENST00000352818 MAEAQ7L5Y9 396 aa8.8□□□□□ -1
CD44-205ENST00000352818 USP37Q86T82 979 aa8.8□□□□□ -1
CD44-205ENST00000352818 EXOC8Q8IYI6 725 aa8.8□□□□□ -1
CD44-205ENST00000352818 MSANTD4Q8NCY6 345 aa8.8□□□□□ -1
CD44-205ENST00000352818 LMO3Q8TAP4 145 aa8.8□□□□□ -1
CD44-205ENST00000352818 BSNDQ8WZ55 320 aa8.8□□□□□ -1
CD44-205ENST00000352818 FAM167AQ96KS9 214 aa8.8□□□□□ -1
CD44-205ENST00000352818 NOX5Q96PH1 765 aa8.8□□□□□ -1
CD44-205ENST00000352818 CBWD1Q9BRT8 395 aa8.8□□□□□ -1
CD44-205ENST00000352818 SYT11Q9BT88 431 aa8.8□□□□□ -1
CD44-205ENST00000352818 CCDC94Q9BW85 323 aaPredicted RBP8.8□□□□□ -1
CD44-205ENST00000352818 POLR3FQ9H1D9 316 aaPredicted RBP8.8□□□□□ -1
CD44-205ENST00000352818 GPRC5CQ9NQ84 441 aa8.8□□□□□ -1
CD44-205ENST00000352818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.8□□□□□ -1
CD44-205ENST00000352818 AJAP1Q9UKB5 411 aaPredicted RBP8.8□□□□□ -1
CD44-205ENST00000352818 SNX12Q9UMY4 172 aa8.8□□□□□ -1
CD44-205ENST00000352818 ST3GAL5Q9UNP4 418 aa8.8□□□□□ -1
CD44-205ENST00000352818 COQ4Q9Y3A0 265 aa8.8□□□□□ -1
CD44-205ENST00000352818 STYXL1Q9Y6J8 313 aa8.8□□□□□ -1
CD44-205ENST00000352818 GREB1Q4ZG55 1949 aa8.8□□□□□ -1
CD44-205ENST00000352818 A0A087X0T9 212 aa8.79□□□□□ -1
CD44-205ENST00000352818 A0A0A6YYK5 440 aaPredicted RBP8.79□□□□□ -1
CD44-205ENST00000352818 GSTTP1A0A1W2PQM5 241 aa8.79□□□□□ -1
CD44-205ENST00000352818 CTAGE15A4D2H0 777 aa8.79□□□□□ -1
CD44-205ENST00000352818 CCDC169A6NNP5 214 aa8.79□□□□□ -1
CD44-205ENST00000352818 INPPL1O15357 1258 aa8.79□□□□□ -1
CD44-205ENST00000352818 ATP8B1O43520 1251 aa8.79□□□□□ -1
CD44-205ENST00000352818 B4GALT3O60512 393 aa8.79□□□□□ -1
CD44-205ENST00000352818 FAM228BP0C875 321 aa8.79□□□□□ -1
CD44-205ENST00000352818 CTAGE8P0CG41 777 aa8.79□□□□□ -1
CD44-205ENST00000352818 TRIM49P0CI25 452 aa8.79□□□□□ -1
CD44-205ENST00000352818 TRIM49CP0CI26 452 aa8.79□□□□□ -1
CD44-205ENST00000352818 CEACAM1P13688 526 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms