RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PSMC4P43686 418 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 CXCL9Q07325 125 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 GRM1Q13255 1194 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 KLHL38Q2WGJ6 581 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 FYB2Q5VWT5 728 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 BBS12Q6ZW61 710 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 LONP2Q86WA8 852 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 TFAP2BQ92481 460 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 TLE6Q9H808 572 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 CALB2P22676 271 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 TNFSF9P41273 254 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 RASSF2P50749 326 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 MYL6P60660 151 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 CAPSQ13938 189 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 TAZQ16635 292 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 TAF1BQ53T94 588 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-202ENST00000352393 DHX37Q8IY37 1157 aaKnown RBP25.75■■□□□ 1.71
CPNE1-202ENST00000352393 SLC7A3Q8WY07 619 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 MTMR12Q9C0I1 747 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 NPHS2Q9NP85 383 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 KANSL3Q9P2N6 904 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 SAE1Q9UBE0 346 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-202ENST00000352393 LNPEPQ9UIQ6 1025 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 E7ENQ6 273 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 EPHB2P29323 1055 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 DYNLT1P63172 113 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 PLEKHG4Q58EX7 1191 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 KCNV2Q8TDN2 545 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 STK32AQ8WU08 396 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 DCAKDQ8WVC6 231 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 NIFKQ9BYG3 293 aaKnown RBP25.75■■□□□ 1.71
CPNE1-202ENST00000352393 SAR1AQ9NR31 198 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 ZFP69BQ9UJL9 534 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 ADAMTS5Q9UNA0 930 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 AGTPBP1Q9UPW5 1226 aa25.75■■□□□ 1.71
CPNE1-202ENST00000352393 TM9SF1O15321 606 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 RPL22P35268 128 aaKnown RBP25.74■■□□□ 1.71
CPNE1-202ENST00000352393 BACE1P56817 501 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 TNFAIP1Q13829 316 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 CTC1Q2NKJ3 1217 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 ZNF394Q53GI3 561 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 WASHC2DQ5SRD0 308 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 RHPN2Q8IUC4 686 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 ARFGAP1Q8N6T3 406 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 ENDOVQ8N8Q3 282 aaKnown RBP25.74■■□□□ 1.71
CPNE1-202ENST00000352393 BANPQ8N9N5 519 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 TTC13Q8NBP0 860 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 FAXDC2Q96IV6 333 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 C10orf88Q9H8K7 445 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 RPL26L1Q9UNX3 145 aaKnown RBP25.74■■□□□ 1.71
CPNE1-202ENST00000352393 NUMBLQ9Y6R0 609 aa25.74■■□□□ 1.71
CPNE1-202ENST00000352393 TTLL13PA6NNM8 815 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 ADCY3O60266 1144 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 PAX7P23759 505 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 PSMA2P25787 234 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 ZPBP2Q6X784 338 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 FBXO36Q8NEA4 188 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 TCP10LQ8TDR4 215 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 VPS33BQ9H267 617 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 STRIP2Q9ULQ0 834 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 LIN7AO14910 233 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-202ENST00000352393 CST8O60676 142 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 LRCH4O75427 683 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 TMEM63AO94886 807 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 TPBGLP0DKB5 382 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 TROVE2P10155 538 aaKnown RBP eCLIP25.73■■□□□ 1.71
CPNE1-202ENST00000352393 IL1R2P27930 398 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 RFC1P35251 1148 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-202ENST00000352393 RNASELQ05823 741 aaKnown RBP25.73■■□□□ 1.71
CPNE1-202ENST00000352393 CLNKQ7Z7G1 428 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 SH3TC2Q8TF17 1288 aa25.73■■□□□ 1.71
CPNE1-202ENST00000352393 ALKBH8Q96BT7 664 aaKnown RBP25.73■■□□□ 1.71
CPNE1-202ENST00000352393 HNRNPCL1O60812 293 aaKnown RBP25.72■■□□□ 1.71
CPNE1-202ENST00000352393 KRT7P08729 469 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 TSHRP16473 764 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 PTPN4P29074 926 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 RFC5P40937 340 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 TMEM132BQ14DG7 1078 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 SMTNL2Q2TAL5 461 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 PTPN20Q4JDL3 420 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 C3orf62Q6ZUJ4 267 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 VPS11Q9H270 941 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 ACAD9Q9H845 621 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 ZWILCHQ9H900 591 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 TAF11Q15544 211 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 DENND1BQ6P3S1 775 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 JOSD2Q8TAC2 188 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 TRIM6Q9C030 488 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-202ENST00000352393 SLC17A7Q9P2U7 560 aa25.72■■□□□ 1.71
CPNE1-202ENST00000352393 IGKV6D-21A0A0A0MT36 114 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 TCRBV7S3A2A0A539 114 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 SIGLEC16A6NMB1 481 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 PIAS1O75925 651 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 LUC7L3O95232 432 aaKnown RBP25.71■■□□□ 1.71
CPNE1-202ENST00000352393 ICAM3P32942 547 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 SGSM1Q2NKQ1 1148 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 MTDHQ86UE4 582 aaKnown RBP25.71■■□□□ 1.71
CPNE1-202ENST00000352393 RFWD2Q8NHY2 731 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 FNIP1Q8TF40 1166 aa25.71■■□□□ 1.71
CPNE1-202ENST00000352393 LRRC42Q9Y546 428 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms