RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 NDST1P52848 882 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 IRX4P78413 519 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 LRRC4Q9HBW1 653 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 ALG13Q9NP73 1137 aaKnown RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 NKIRAS1Q9NYS0 192 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 COQ4Q9Y3A0 265 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 A0A0G2JLL6 359 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 RARGP13631 454 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 RFC1P35251 1148 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 SCTRP47872 440 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 RABGGTBP53611 331 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 EIF3BP55884 814 aaKnown RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 OGDHQ02218 1023 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 GCNT1Q02742 428 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 CCL14Q16627 93 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 PRRT2Q7Z6L0 340 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 ZBED8Q8IZ13 594 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 BRI3BPQ8WY22 251 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 IP6K2Q9UHH9 426 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 BAIAP2L1Q9UHR4 511 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 SAT1P21673 171 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 STX2P32856 288 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 PPP2R5EQ16537 467 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 ANKRD20A8PQ5CZ79 823 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 C6orf118Q5T5N4 469 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 CCDC197Q8NCU1 140 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 GRK7Q8WTQ7 553 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 TINF2Q9BSI4 451 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 IQCGQ9H095 443 aaKnown RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
SMPD4-201ENST00000351288 NINJ2Q9NZG7 142 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 STK38LQ9Y2H1 464 aa10.93□□□□□ -0.66
SMPD4-201ENST00000351288 EXOC1LA0A1B0GW35 172 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 A6NJR5 290 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 I3L4J1 428 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 HUS1O60921 280 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 TJP3O95049 919 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 NUDT17P0C025 328 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 MMP13P45452 471 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 NOMO3P69849 1222 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 C15orf59Q2T9L4 293 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-201ENST00000351288 GOLGA7BQ2TAP0 167 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 RAB6CQ53S08 254 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 C6orf89Q6UWU4 347 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-201ENST00000351288 TLK2Q86UE8 772 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 EXOC8Q8IYI6 725 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 KIRREL3Q8IZU9 778 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 MAIP1Q8WWC4 291 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 TFAP2BQ92481 460 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 C18orf25Q96B23 403 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-201ENST00000351288 SNF8Q96H20 258 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 RBM15Q96T37 977 aaKnown RBP eCLIP10.92□□□□□ -0.662e-7■■■■□ 19.9
SMPD4-201ENST00000351288 RAB6CQ9H0N0 254 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 SAMD15Q9P1V8 674 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 FSCN2O14926 492 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 MAGEB2O15479 319 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-201ENST00000351288 ACO1P21399 889 aaKnown RBP10.92□□□□□ -0.66
SMPD4-201ENST00000351288 ARL2P36404 184 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 RBP5P82980 135 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 MAP3K10Q02779 954 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 TAF5Q15542 800 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 CNGA2Q16280 664 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 MON1BQ7L1V2 547 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 FBXL18Q96ME1 805 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 CITO14578 2027 aa10.92□□□□□ -0.66
SMPD4-201ENST00000351288 EIF4E1BA6NMX2 242 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 MCF2LO15068 1137 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 CD48P09326 243 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 IVDP26440 423 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 SDC4P31431 198 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 PDIA2Q13087 525 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 WDR49Q8IV35 697 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 BEST2Q8NFU1 509 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 CFAP36Q96G28 342 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 FAM81BQ96LP2 452 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 ZNF317Q96PQ6 595 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 NTPCRQ9BSD7 190 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 CEP41Q9BYV8 373 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 NXF3Q9H4D5 531 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 ST6GALNAC4Q9H4F1 302 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 LRRC19Q9H756 370 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 KLC4Q9NSK0 619 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 ZNF646O15015 1829 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 HCRTO43612 131 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 PROSCO94903 275 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 HSPA6P17066 643 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 SNRPFP62306 86 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 PTPN11Q06124 597 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 SLMAPQ14BN4 828 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 EFTUD2Q15029 972 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■■■■■ 35.4
SMPD4-201ENST00000351288 EIF1ADQ8N9N8 165 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 FAM71DQ8N9W8 422 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 ADAM32Q8TC27 787 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms