RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SNAP23O00161 211 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 GCAP28676 217 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 CCNIQ14094 377 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 EFHC1Q5JVL4 640 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 MCF2L2Q86YR7 1114 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 HSPH1Q92598 858 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 ATP2A3Q93084 1043 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 DCUN1D1Q96GG9 259 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 BTBD9Q96Q07 612 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 RANBP9Q96S59 729 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 CNNM2Q9H8M5 875 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 AP4B1Q9Y6B7 739 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 CHEK2O96017 543 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 POLR2MP0CAP2 368 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 BTDP43251 543 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 NPEPPSP55786 919 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 CNGA3Q16281 694 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 IL23RQ5VWK5 629 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 CPNE8Q86YQ8 564 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 AHI1Q8N157 1196 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 ALLCQ8N6M5 410 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 C12orf50Q8NA57 414 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 BORCS5Q969J3 196 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 PLK2Q9NYY3 685 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 NENFQ9UMX5 172 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 DIS3Q9Y2L1 958 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 GPSM3Q9Y4H4 160 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 KRBA1A5PL33 1030 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 DENRO43583 198 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A9O60656 530 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 PIAS1O75925 651 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 DLATP10515 647 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A6P19224 532 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A1P22309 533 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A4P22310 534 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 RFC4P35249 363 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A3P35503 534 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A5P35504 534 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 NUP107P57740 925 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 XIAPP98170 497 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 PRKG1Q13976 671 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 FAM182AQ5T1J6 154 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 TRIML2Q8N7C3 387 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 DDI1Q8WTU0 396 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 CHPT1Q8WUD6 406 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 PSPC1Q8WXF1 523 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 RFFLQ8WZ73 363 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 TSG101Q99816 390 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 CCDC77Q9BR77 488 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 MAK16Q9BXY0 300 aaKnown RBP11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A7Q9HAW7 530 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A10Q9HAW8 530 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 UGT1A8Q9HAW9 530 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 ANLNQ9NQW6 1124 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 KLHL3Q9UH77 587 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 ALG6Q9Y672 507 aa11.14□□□□□ -0.63
CAPN3-203ENST00000349748 SYNGAP1Q96PV0 1343 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 DLDP09622 509 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PEX3P56589 373 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 ADAM17P78536 824 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 RALGPS1Q5JS13 557 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 AAGABQ6PD74 315 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 GOLM1Q8NBJ4 401 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 KLF6Q99612 283 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 CTRCQ99895 268 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TSSK1BQ9BXA7 367 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TAS2R14Q9NYV8 317 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PPARGC1AQ9UBK2 798 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 MTO1Q9Y2Z2 717 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TYROBPO43914 113 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 PEX1O43933 1283 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 BAIAP3O94812 1187 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 KRT4P19013 534 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 ALDH1A3P47895 512 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 FKBP3Q00688 224 aaKnown RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 FOXD4Q12950 439 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 ZNF829Q3KNS6 432 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 TRIM59Q8IWR1 403 aa11.13□□□□□ -0.63
CAPN3-203ENST00000349748 SLC38A6Q8IZM9 456 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms