RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 SFR1Q86XK3 245 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 FAM160A2Q8N612 972 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 KCNN1Q92952 543 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 FIZ1Q96SL8 496 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 ADPGKQ9BRR6 497 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 KIFC3Q9BVG8 833 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 KCNF1Q9H3M0 494 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 C17orf75Q9HAS0 396 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 RXFP3Q9NSD7 469 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 RBM12Q9NTZ6 932 aaKnown RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 RAB23Q9ULC3 237 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 MAFFQ9ULX9 164 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 WASF3Q9UPY6 502 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 TNFSF13BQ9Y275 285 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 PCDHB13Q9Y5F0 798 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 NUP205Q92621 2012 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 ATG2BQ96BY7 2078 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 LGALS16A8MUM7 142 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 HEPACAM2A8MVW5 462 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 PODXLO00592 558 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 TRAPPC3O43617 180 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 TPM2P07951 284 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 GJA1P17302 382 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 ABCD1P33897 745 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 HOXD13P35453 343 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 RAP1GAPP47736 663 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 SNRPFP62306 86 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 RAD51AP2Q09MP3 1159 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 TRIM14Q14142 442 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 MYBPC2Q14324 1141 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 ATF7IP2Q5U623 682 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 C1orf228Q6PIY5 440 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 PRR23BQ6ZRT6 265 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 PDZD4Q76G19 769 aaPredicted RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 DAW1Q8N136 415 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 MYCT1Q8N699 235 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 GLIS3Q8NEA6 775 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 ZSCAN18Q8TBC5 510 aaPredicted RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 KIAA1524Q8TCG1 905 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CACTINQ8WUQ7 758 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 DDX1Q92499 740 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 IQCDQ96DY2 449 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CHFRQ96EP1 664 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 DRC1Q96MC2 740 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 ACO2Q99798 780 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 NTPCRQ9BSD7 190 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 TUBGCP2Q9BSJ2 902 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CDT1Q9H211 546 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 MRPL44Q9H9J2 332 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CYP4F11Q9HBI6 524 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 KCND1Q9NSA2 647 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CNTN3Q9P232 1028 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 CGNQ9P2M7 1197 aaKnown RBP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 ANGPTL2Q9UKU9 493 aa10.46□□□□□ -0.73
MRPL55-204ENST00000348259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.46□□□□□ -0.73
MRPL55-204ENST00000348259 PTPRDP23468 1912 aa10.46□□□□□ -0.74
MRPL55-204ENST00000348259 MYH11P35749 1972 aa10.46□□□□□ -0.74
MRPL55-204ENST00000348259 CCDC163A0A0D9SF12 145 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 PRRG1O14668 218 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 TEX33O43247 280 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 NRDCO43847 1150 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 CALUO43852 315 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 HIP1RO75146 1068 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 PPP1R37O75864 691 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 EPN2O95208 641 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 ZNF806P0C7X5 589 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 PLS3P13797 630 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 CTHP32929 405 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 CLCN1P35523 988 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 SOX9P48436 509 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 AARSP49588 968 aaKnown RBP eCLIP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 TEAD2Q15562 447 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 HSP90AA4PQ58FG1 418 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 DGKKQ5KSL6 1271 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 ARMCX5Q6P1M9 558 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 PKN3Q6P5Z2 889 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 GOLGA5Q8TBA6 731 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 KIFAP3Q92845 792 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 HVCN1Q96D96 273 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 LOXL4Q96JB6 756 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 FGFBP2Q9BYJ0 223 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 ZHX3Q9H4I2 956 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 C8orf33Q9H7E9 229 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
MRPL55-204ENST00000348259 RALYQ9UKM9 306 aaKnown RBP10.45□□□□□ -0.74
MRPL55-204ENST00000348259 LOC400499M0QZD8 3231 aa10.44□□□□□ -0.74
MRPL55-204ENST00000348259 SLC38A8A6NNN8 435 aa10.44□□□□□ -0.74
MRPL55-204ENST00000348259 SPECC1L-ADORA2AF8WAN1 911 aa10.44□□□□□ -0.74
MRPL55-204ENST00000348259 H7C4K7 107 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms