RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 H3BRB1 525 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 SGPL1O95470 568 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PRLRP16471 622 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 BYSLQ13895 437 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 CENPUQ71F23 418 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 ACER1Q8TDN7 264 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 RAPGEF5Q92565 580 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 TUT1Q9H6E5 874 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 DDTLA6NHG4 134 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 FAM47E-STBD1D6RA91 191 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 KITP10721 976 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 AXLP30530 894 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PSEN2P49810 448 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PDIA2Q13087 525 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 METTL7BQ6UX53 244 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 ATL2Q8NHH9 583 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 LRGUKQ96M69 825 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 NFKBIZQ9BYH8 718 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 DHX35Q9H5Z1 703 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 FGFR1OP2Q9NVK5 253 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 EFHC1Q5JVL4 640 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 C4orf33Q8N1A6 199 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 FAF2Q96CS3 445 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 OTUB1Q96FW1 271 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 GIMAP4Q9NUV9 329 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 CCDC195A0A1B0GUA6 201 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 TTC36A6NLP5 189 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 WNT10BO00744 389 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PRMT3O60678 531 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 GNL1P36915 607 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-202ENST00000346436 ACTR2P61160 394 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 MTFR1Q15390 333 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 PPP4R4Q6NUP7 873 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 ATPAF2Q8N5M1 289 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 TMBIM4Q9HC24 238 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 SLC40A1Q9NP59 571 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 TXLNGQ9NUQ3 528 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 TMX2Q9Y320 296 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 CAMTA1Q9Y6Y1 1673 aa11.37□□□□□ -0.59
CLCN6-202ENST00000346436 F5H5T6 163 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ARP10275 920 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PEX6Q13608 980 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 LRRC71Q8N4P6 559 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 TAAR1Q96RJ0 339 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PRR23AA6NEV1 266 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 TUFMP49411 452 aaKnown RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 KCNMA1Q12791 1236 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 SGCGQ13326 291 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 SPARCL1Q14515 664 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 AADACL2Q6P093 401 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ZFPM1Q8IX07 1006 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 C4orf32Q8N8J7 132 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 KDM4CQ9H3R0 1056 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 TPX2Q9ULW0 747 aaKnown RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PCDHGB4Q9UN71 923 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ORC6Q9Y5N6 252 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 TOM1L1O75674 476 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PDHA1P08559 390 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 OCM2P0CE71 109 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 LHX1P48742 406 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 LRRC34Q8IZ02 419 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 FBXO25Q8TCJ0 367 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 WNK4Q96J92 1243 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ATRNO75882 1429 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ADH1AP07327 375 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 CYP2C8P10632 490 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 MUTP22033 750 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 HSPA9P38646 679 aaKnown RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ARSEP51690 589 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 HIRAP54198 1017 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 BCAR1P56945 870 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PKN2Q16513 984 aaKnown RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 ECM1Q16610 540 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 P3H1Q32P28 736 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 PABPC1LQ4VXU2 614 aaKnown RBP11.36□□□□□ -0.59
CLCN6-202ENST00000346436 KCNQ5Q9NR82 932 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
CLCN6-202ENST00000346436 TMEM120BA0PK00 339 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 FAM86B1E9PN63 330 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 MAPK13O15264 365 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 LUC7L3O95232 432 aaKnown RBP11.35□□□□□ -0.59
CLCN6-202ENST00000346436 FAM86B2P0C5J1 330 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 C7orf61Q8IZ16 206 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms