RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 SYCP3Q8IZU3 236 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 FAM160A2Q8N612 972 aaPredicted RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 LRRC52Q8N7C0 313 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 LEO1Q8WVC0 666 aaPredicted RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 GCNAQ96QF7 691 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 CRTAC1Q9NQ79 661 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 TDP1Q9NUW8 608 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 TMEM30AQ9NV96 361 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 GDAP2Q9NXN4 497 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 GMEB2Q9UKD1 530 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 CDV3Q9UKY7 258 aaKnown RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 WNT6Q9Y6F9 365 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 WDFY3Q8IZQ1 3526 aa11.76□□□□□ -0.53
UBE2A-201ENST00000346330 TPRP12270 2363 aaKnown RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 MAP1BP46821 2468 aaKnown RBP11.76□□□□□ -0.53
UBE2A-201ENST00000346330 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
UBE2A-201ENST00000346330 HUS1O60921 280 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 KRT37O76014 449 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 NOL4O94818 638 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 RETP07949 1114 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 PDCP20941 246 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 PNPLA4P41247 253 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 NASPP49321 788 aaPredicted RBP11.75□□□□□ -0.53
UBE2A-201ENST00000346330 CACNA2D1P54289 1103 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 TSPY1Q01534 308 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 PPP2R5DQ14738 602 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 SF3A2Q15428 464 aaKnown RBP11.75□□□□□ -0.53
UBE2A-201ENST00000346330 ZNF77Q15935 545 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 CCDC73Q6ZRK6 1079 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 MON1AQ86VX9 555 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 SCN4BQ8IWT1 228 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 ARL14EPQ8N8R7 260 aaPredicted RBP11.75□□□□□ -0.53
UBE2A-201ENST00000346330 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
UBE2A-201ENST00000346330 ELMO3Q96BJ8 720 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 MYRFLQ96LU7 910 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 SMOC1Q9H4F8 434 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 TRPC7Q9HCX4 862 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 INTS13Q9NVM9 706 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 EXOC7Q9UPT5 735 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
UBE2A-201ENST00000346330 TRDMT1O14717 391 aaKnown RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 SCAMP3O14828 347 aaKnown RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 TGFB1I1O43294 461 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 RNF40O75150 1001 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 CST3P01034 146 aaPredicted RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 PDGFRBP09619 1106 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 TMEM191BP0C7N4 346 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 CSH1P0DML2 217 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 CSH2P0DML3 217 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 HOXA6P31267 233 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 GJA4P35212 333 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 TXLNAP40222 546 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 GALK1P51570 392 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 RBP5P82980 135 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 NFE2Q16621 373 aaPredicted RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 FAM171BQ6P995 826 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 C1orf228Q6PIY5 440 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 PRR23CQ6ZRP0 262 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 KBTBD6Q86V97 674 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 WDR5BQ86VZ2 330 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 SFTPA1Q8IWL2 248 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 GPD1LQ8N335 351 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 TOP6BLQ8N6T0 577 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 MRPS31Q92665 395 aaKnown RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 MYLPFQ96A32 169 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 HPDLQ96IR7 371 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 ABCB6Q9NP58 842 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 KBTBD4Q9NVX7 518 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 THG1LQ9NWX6 298 aaKnown RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 RAB23Q9ULC3 237 aa11.74□□□□□ -0.53
UBE2A-201ENST00000346330 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
UBE2A-201ENST00000346330 SPEGQ15772 3267 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 PRR5-ARHGAP8B1AHC4 643 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 AXIN1O15169 862 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 STX6O43752 255 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 BDNFP23560 247 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 ARHGAP8P85298 464 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 MYL7Q01449 175 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 USP4Q13107 963 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms