RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 LMO3Q8TAP4 145 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 MYCBPAPQ8TBZ2 947 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 ATXN2LQ8WWM7 1075 aaKnown RBP12.61□□□□□ -0.39
SNCA-202ENST00000345009 TATDN2Q93075 761 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNCA-202ENST00000345009 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
SNCA-202ENST00000345009 RIPOR3Q96MK2 946 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 RTP3Q9BQQ7 232 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 ADAM7Q9H2U9 754 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 UBE2TQ9NPD8 197 aaPredicted RBP12.61□□□□□ -0.39
SNCA-202ENST00000345009 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
SNCA-202ENST00000345009 APEX2Q9UBZ4 518 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 KIAA1257Q9ULG3 409 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 REV3LO60673 3130 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 CCDC195A0A1B0GUA6 201 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 MTMR11A4FU01 709 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 GLP2RO95838 553 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 PON1P27169 355 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 LTBRP36941 435 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 MTHFRP42898 656 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 RAP1GAPP47736 663 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 RPL10AP62906 217 aaKnown RBP12.6□□□□□ -0.39
SNCA-202ENST00000345009 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 DUSP4Q13115 394 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 VEPH1Q14D04 833 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 TAF12Q16514 161 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 MGAT5BQ3V5L5 792 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 LEXMQ3ZCV2 418 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 IQCEQ6IPM2 695 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 LRRTM3Q86VH5 581 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 OSTM1Q86WC4 334 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 ATAD1Q8NBU5 361 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
SNCA-202ENST00000345009 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
SNCA-202ENST00000345009 NECTIN4Q96NY8 510 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 PGLYRP2Q96PD5 576 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 RHOBTB2Q9BYZ6 727 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 PRKD2Q9BZL6 878 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 CLEC1BQ9P126 229 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 DAAM1Q9Y4D1 1078 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 ASB3Q9Y575 518 aa12.6□□□□□ -0.39
SNCA-202ENST00000345009 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 MYBPHLA2RUH7 354 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 H3BQ06 376 aaPredicted RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 HRO43593 1189 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 LRRN2O75325 713 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 TBX10O75333 385 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 CILPO75339 1184 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 ATP1A3P13637 1013 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 SLC9A1P19634 815 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 SLC8A3P57103 927 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 MRPS5P82675 430 aaKnown RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 DLX2Q07687 328 aaPredicted RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 SMAD4Q13485 552 aaKnown RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 MDH1BQ5I0G3 518 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 RARS2Q5T160 578 aaKnown RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 TMC5Q6UXY8 1006 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 RRAGAQ7L523 313 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 ITIH5Q86UX2 942 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 SMG7Q92540 1137 aaKnown RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 ELMO3Q96BJ8 720 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 MSLNLQ96KJ4 702 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 CEP295NLQ96MC4 621 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 SEPT5Q99719 369 aaPredicted RBP12.59□□□□□ -0.39
SNCA-202ENST00000345009 MED10Q9BTT4 135 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 SDCBP2Q9H190 292 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 EHD2Q9NZN4 543 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 SLC27A5Q9Y2P5 690 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 PCDHB4Q9Y5E5 795 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 INSL5Q9Y5Q6 135 aa12.59□□□□□ -0.39
SNCA-202ENST00000345009 TRIM66O15016 1216 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 ATP2C2O75185 946 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 POU2F2P09086 479 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 PAEPP09466 180 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 HAPLN1P10915 354 aaPredicted RBP12.58□□□□□ -0.4
SNCA-202ENST00000345009 KRT5P13647 590 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 PTPN2P17706 415 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 ANXA13P27216 316 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 GRIK1P39086 918 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 MAGEA11P43364 429 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
SNCA-202ENST00000345009 CLUL1Q15846 466 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 PHLDB3Q6NSJ2 640 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 TMEM270Q6UE05 265 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms