RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 TAF12Q16514 161 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 ARHGEF19Q8IW93 802 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 SCN4BQ8IWT1 228 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 TWNKQ96RR1 684 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 FAM124BQ9H5Z6 455 aaPredicted RBP22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 UBE2TQ9NPD8 197 aaPredicted RBP22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 HCFC1R1Q9NWW0 138 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 TCF20Q9UGU0 1960 aaKnown RBP22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 PTPN2P17706 415 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 PON1P27169 355 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 COPB1P53618 953 aaKnown RBP22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 VEPH1Q14D04 833 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 IQCB1Q15051 598 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 FKBP15Q5T1M5 1219 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 PHLDB3Q6NSJ2 640 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 LUZP1Q86V48 1076 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 CRYBG2Q8N1P7 616 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 CORO1BQ9BR76 489 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 HSD3B7Q9H2F3 369 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 CEP72Q9P209 647 aa22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 DNMT3BQ9UBC3 853 aaKnown RBP22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 LIMA1Q9UHB6 759 aaKnown RBP22.14■■□□□ 1.14
SMARCB1-202ENST00000344921 GOLGA6L19H0YKK7 550 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 ATP1A3P13637 1013 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 SP100P23497 879 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 GRIK1P39086 918 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 RPL10AP62906 217 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 GCNT1Q02742 428 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 LRSAM1Q6UWE0 723 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 C12orf29Q8N999 325 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 WHAMMQ8TF30 809 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 GIPC2Q8TF65 315 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 KAT5Q92993 513 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 HEXIM2Q96MH2 286 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 PHF7Q9BWX1 381 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 ELOVL4Q9GZR5 314 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 WDR6Q9NNW5 1121 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 FAM49BQ9NUQ9 324 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 PCDHB4Q9Y5E5 795 aa22.14■■□□□ 1.13
SMARCB1-202ENST00000344921 ATP8B3O60423 1300 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 CLDN5O00501 218 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 PAPLNO95428 1278 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 POU2F2P09086 479 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 NTHL1P78549 312 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 DDR2Q16832 855 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 PABPC1LQ4VXU2 614 aaKnown RBP22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 ITIH5Q86UX2 942 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 GPR152Q8TDT2 470 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 TMEM176AQ96HP8 235 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 RPGRIP1Q96KN7 1286 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 B3GNT5Q9BYG0 378 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 TSPY26PQ9H489 355 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 APEX2Q9UBZ4 518 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 CLUHO75153 1309 aa22.13■■□□□ 1.13
SMARCB1-202ENST00000344921 CCDC130P13994 396 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 ATF6P18850 670 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 ANXA13P27216 316 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 GPR15P49685 360 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 MFAP3P55082 362 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 APBA1Q02410 837 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 TMEM270Q6UE05 265 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 VSTM1Q6UX27 236 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 ZNF518BQ9C0D4 1074 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 ASB3Q9Y575 518 aa22.12■■□□□ 1.13
SMARCB1-202ENST00000344921 RHOP08100 348 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 ADORA2BP29275 332 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 MAGEA11P43364 429 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 RAD23BP54727 409 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 CYP4A22Q5TCH4 519 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 SDHAF4Q5VUM1 108 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 GJB7Q6PEY0 223 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 SLC2A14Q8TDB8 520 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 CYFIP2Q96F07 1278 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 FAM81BQ96LP2 452 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 ASAH2Q9NR71 780 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 FSHRP23945 695 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 UBXN1Q04323 297 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 ARHGAP44Q17R89 818 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 PDZD4Q76G19 769 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 GET4Q7L5D6 327 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 ENOSF1Q7L5Y1 443 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 DNAJB7Q7Z6W7 309 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 SLC4A11Q8NBS3 891 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 PSMG2Q969U7 264 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 PRKAG3Q9UGI9 489 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 NR2E1Q9Y466 385 aa22.11■■□□□ 1.13
SMARCB1-202ENST00000344921 DOCK6Q96HP0 2047 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 LRRC10BA6NIK2 292 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 TRIM66O15016 1216 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 MYL4P12829 197 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 KRT5P13647 590 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 KCNMA1Q12791 1236 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 FAM35AQ86V20 835 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 ADHFE1Q8IWW8 467 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 HS6ST3Q8IZP7 471 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 FUKQ8N0W3 1084 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 SMARCD1Q96GM5 515 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 PCMTD1Q96MG8 357 aaPredicted RBP22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 KREMEN1Q96MU8 473 aa22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms