RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TASP1Q9H6P5 420 aa17.17■□□□□ 0.34
ATG4B-201ENST00000344376 MAGED2Q9UNF1 606 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-201ENST00000344376 HEPACAM2A8MVW5 462 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 A8MXQ7 604 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 ATP2C2O75185 946 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 AKAP3O75969 853 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 DDX6P26196 483 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATG4B-201ENST00000344376 PIK3CAP42336 1068 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 GPR15P49685 360 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 STARD6P59095 220 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 DLG4P78352 724 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 CYP4F8P98187 520 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 DDR2Q16832 855 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 CCDC142Q17RM4 750 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 SGSM1Q2NKQ1 1148 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 ZACNQ401N2 412 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 STXBP5Q5T5C0 1151 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF658Q5TYW1 1059 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-201ENST00000344376 VSTM1Q6UX27 236 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-201ENST00000344376 MFSD6LQ8IWD5 586 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 MYCBPAPQ8TBZ2 947 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 TAF4BQ92750 862 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 IMPG2Q9BZV3 1241 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 IL21Q9HBE4 155 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 CRTAC1Q9NQ79 661 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 SIT1Q9Y3P8 196 aa17.16■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF263O14978 683 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 CETN3O15182 167 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 PI15O43692 258 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 HMGA1P17096 107 aaKnown RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 ANXA13P27216 316 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 GDI1P31150 447 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 NLRP12P59046 1061 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 TCF15Q12870 199 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 MDH1BQ5I0G3 518 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 SDHAF4Q5VUM1 108 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 SV2AQ7L0J3 742 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 CCDC105Q8IYK2 499 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 MRPS31Q92665 395 aaKnown RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 CEP295NLQ96MC4 621 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 KANSL1LA0AUZ9 987 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 SLC38A8A6NNN8 435 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 NOL4O94818 638 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 VNN1O95497 513 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 EPB41P11171 864 aaKnown RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 PTPN1P18031 435 aaKnown RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 GRIK1P39086 918 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 STIM1Q13586 685 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 COBLL1Q53SF7 1204 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 SCARA5Q6ZMJ2 495 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 TPRG1Q6ZUI0 275 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 ELOA2Q8IYF1 753 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 PJA1Q8NG27 643 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 TRMT2BQ96GJ1 504 aaKnown RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 PCED1BQ96HM7 432 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 MKNK1Q9BUB5 465 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 SMYD3Q9H7B4 428 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 OBP2AQ9NY56 170 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 EHD2Q9NZN4 543 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 MRPS17Q9Y2R5 130 aaKnown RBP17.15■□□□□ 0.34
ATG4B-201ENST00000344376 ATP8B3O60423 1300 aa17.15■□□□□ 0.34
ATG4B-201ENST00000344376 SOBPA7XYQ1 873 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 TRIM66O15016 1216 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 TRIM49P0CI25 452 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 TRIM49CP0CI26 452 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 TRIM21P19474 475 aaKnown RBP17.14■□□□□ 0.33
ATG4B-201ENST00000344376 BDNFP23560 247 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 WEE1P30291 646 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 AVPR1AP37288 418 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 PRCPP42785 496 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 DTWD2Q8NBA8 298 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 B3GALNT2Q8NCR0 500 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 SPATA20Q8TB22 786 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 TNIP3Q96KP6 325 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 SPATA17Q96L03 361 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 DDX23Q9BUQ8 820 aaKnown RBP17.14■□□□□ 0.33
ATG4B-201ENST00000344376 FOXQ1Q9C009 403 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 ELOVL4Q9GZR5 314 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 TRPV5Q9NQA5 729 aa17.14■□□□□ 0.33
ATG4B-201ENST00000344376 STX10O60499 249 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 HLA-DRAP01903 254 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 F11P03951 625 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 GCLMP48507 274 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 UBXN2BQ14CS0 331 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 ZNF852Q6ZMS4 543 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 CMTM8Q8IZV2 173 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 STKLD1Q8NE28 680 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 CSGALNACT1Q8TDX6 532 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 ATOH1Q92858 354 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-201ENST00000344376 MYRFLQ96LU7 910 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 NELL2Q99435 816 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 DPEP3Q9H4B8 488 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 HEBP1Q9NRV9 189 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
ATG4B-201ENST00000344376 H0Y858 1186 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 MAN2B1O00754 1011 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms