RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 RMDN1Q96DB5 314 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 FUBP3Q96I24 572 aaKnown RBP eCLIP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SCLT1Q96NL6 688 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 NUP58Q9BVL2 599 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 TRIM4Q9C037 500 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 RAB23Q9ULC3 237 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF510Q9Y2H8 683 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 STARD13Q9Y3M8 1113 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PCDHB2Q9Y5E7 798 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PCDHGA1Q9Y5H4 931 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SLC12A7Q9Y666 1083 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 KRBA1A5PL33 1030 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 GOLGA6L4A6NEF3 574 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SRRM3A6NNA2 597 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 XBP1P17861 261 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 IBSPP21815 317 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 RPL13P26373 211 aaKnown RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 GGCXP38435 758 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 STIM1Q13586 685 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 RTN1Q16799 776 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PPP1R15BQ5SWA1 713 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 SLC23A3Q6PIS1 610 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 TNFRSF25Q93038 417 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 UBL7Q96S82 380 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 PHF20Q9BVI0 1012 aa7.82□□□□□ -1.16
ZNF540-202ENST00000343599 HOOK1Q9UJC3 728 aaKnown RBP7.82□□□□□ -1.16
ZNF540-202ENST00000343599 B4E1Z4 1266 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 ACKR2O00590 384 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 NMT2O60551 498 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 TSPAN1O60635 241 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 MCM3P25205 808 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 ME3Q16798 604 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 RSPO4Q2I0M5 234 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM196Q5HYL7 178 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 IER5LQ5T953 404 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 EFCAB12Q6NXP0 572 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 NOP9Q86U38 636 aaKnown RBP7.81□□□□□ -1.16
ZNF540-202ENST00000343599 VPS52Q8N1B4 723 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 AOPEPQ8N6M6 819 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 PGBD1Q96JS3 809 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 HSD17B14Q9BPX1 270 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 TTPALQ9BTX7 342 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 PCDHGB7Q9Y5F8 929 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 GOLGA8KD6RF30 607 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 C2CD2LO14523 706 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 ATP6V1G1O75348 118 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 ABL1P00519 1130 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 EPB41P11171 864 aaKnown RBP7.81□□□□□ -1.16
ZNF540-202ENST00000343599 CHRNB1P11230 501 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 INHBCP55103 352 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 FUT10Q6P4F1 479 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 IL27RAQ6UWB1 636 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 HAUS6Q7Z4H7 955 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 RAB44Q7Z6P3 723 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-202ENST00000343599 CCHCR1Q8TD31 782 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF570Q96NI8 536 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 APOL6Q9BWW8 343 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 MAN1C1Q9NR34 630 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 FAM217BQ9NTX9 383 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-202ENST00000343599 UTP6Q9NYH9 597 aaKnown RBP7.81□□□□□ -1.16
ZNF540-202ENST00000343599 MARK1Q9P0L2 795 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 IFNKQ9P0W0 207 aa7.81□□□□□ -1.16
ZNF540-202ENST00000343599 FAM86C2PA6NEL3 165 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PFKFB2O60825 505 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ATP9AO75110 1047 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ATP6V1G2O95670 118 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 MYCLP12524 364 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PNPLA4P41247 253 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SCNN1BP51168 640 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 AK2P54819 239 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF200P98182 395 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PRKCEQ02156 737 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SERINC3Q13530 473 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ZBTB6Q15916 424 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 EMC10Q5UCC4 262 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ZNF461Q8TAF7 563 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SMARCD2Q92925 531 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 SLC35B4Q969S0 331 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 FAM227BQ96M60 508 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 JAKMIP1Q96N16 626 aaKnown RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 MTRQ99707 1265 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 TTLL2Q9BWV7 592 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 MFSD1Q9H3U5 465 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 BARX2Q9UMQ3 279 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 TMEM98Q9Y2Y6 226 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 COL27A1Q8IZC6 1860 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 NRP1O14786 923 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PRC1O43663 620 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 OLFM2O95897 454 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 BMP15O95972 392 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 MPP3Q13368 585 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 RIPK1Q13546 671 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 ENPP2Q13822 863 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PABPC1LQ4VXU2 614 aaKnown RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 PKDCCQ504Y2 493 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 LACTB2Q53H82 288 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-202ENST00000343599 NAA35Q5VZE5 725 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
ZNF540-202ENST00000343599 FAM131CQ96AQ9 280 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms