RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ZSWIM3Q96MP5 696 aa19.28■□□□□ 0.68
USF2-202ENST00000343550 MMS19Q96T76 1030 aa19.28■□□□□ 0.68
USF2-202ENST00000343550 ASAH2Q9NR71 780 aa19.28■□□□□ 0.68
USF2-202ENST00000343550 HEBP1Q9NRV9 189 aa19.28■□□□□ 0.68
USF2-202ENST00000343550 SPATA6Q9NWH7 488 aaPredicted RBP19.28■□□□□ 0.68
USF2-202ENST00000343550 DDX43Q9NXZ2 648 aaKnown RBP19.28■□□□□ 0.68
USF2-202ENST00000343550 BICDL2A1A5D9 508 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 MOSPD3O75425 235 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 FAM163BP0C2L3 166 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 MYL4P12829 197 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 GTF2H1P32780 548 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 STX17P56962 302 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 DUSP4Q13115 394 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 GRM2Q14416 872 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 SLC39A12Q504Y0 691 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 ZNF852Q6ZMS4 543 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 KBTBD7Q8WVZ9 684 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 DNASE1L2Q92874 299 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 SMARCD2Q92925 531 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 CEP63Q96MT8 703 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 TRMT61BQ9BVS5 477 aaKnown RBP19.27■□□□□ 0.68
USF2-202ENST00000343550 CRISPLD1Q9H336 500 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 NXF1Q9UBU9 619 aaKnown RBP19.27■□□□□ 0.68
USF2-202ENST00000343550 CTNND2Q9UQB3 1225 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 SLC27A5Q9Y2P5 690 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 YIPF1Q9Y548 306 aa19.27■□□□□ 0.68
USF2-202ENST00000343550 MTMR11A4FU01 709 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 GJA1P17302 382 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 LMO2P25791 158 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 MAGEA9P43362 315 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 MYL7Q01449 175 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 PAK1Q13153 545 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 DCP1BQ8IZD4 617 aaKnown RBP19.26■□□□□ 0.67
USF2-202ENST00000343550 CLDN23Q96B33 292 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 ELMO3Q96BJ8 720 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 BRD9Q9H8M2 597 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 HSFX1Q9UBD0 423 aa19.26■□□□□ 0.67
USF2-202ENST00000343550 MRPS17Q9Y2R5 130 aaKnown RBP19.26■□□□□ 0.67
USF2-202ENST00000343550 NCAM2O15394 837 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 LAMTOR5O43504 91 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 HCRTO43612 131 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TACC1O75410 805 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 HLA-DRAP01903 254 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 WARSP23381 471 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 ACAT1P24752 427 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 TARSP26639 723 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 CDR1P51861 262 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TNNC1P63316 161 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 SMARCB1Q12824 385 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 ZNF699Q32M78 642 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 ZNF528Q3MIS6 628 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 MLKLQ8NB16 471 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TAF4BQ92750 862 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 MRPL45Q9BRJ2 306 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 TMEM8AQ9HCN3 771 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TMLHEQ9NVH6 421 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 ARMCX3Q9UH62 379 aaPredicted RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 FBXO4Q9UKT5 387 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 SHISA7A6NL88 538 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 ASS1P00966 412 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 PSMC3P17980 439 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 VIPR2P41587 438 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 EPHB3P54753 998 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TSPY1Q01534 308 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 PLD1Q13393 1074 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TEAD2Q15562 447 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 ZNF667Q5HYK9 610 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 KRT39Q6A163 491 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 VITQ6UXI7 678 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 ZSCAN18Q8TBC5 510 aaPredicted RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 TAS1R2Q8TE23 839 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 C2orf15Q8WU43 125 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 IRF7Q92985 503 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 MED15Q96RN5 788 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 PKMYT1Q99640 499 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 GPR88Q9GZN0 384 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 MMRN2Q9H8L6 949 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 TRPV4Q9HBA0 871 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 METTL14Q9HCE5 456 aaKnown RBP19.25■□□□□ 0.67
USF2-202ENST00000343550 RWDD2AQ9UIY3 292 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 GTF3C4Q9UKN8 822 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
USF2-202ENST00000343550 STX10O60499 249 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 PDGFRBP09619 1106 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 PCSK1P29120 753 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 RPS9P46781 194 aaKnown RBP19.24■□□□□ 0.67
USF2-202ENST00000343550 ALDH1A3P47895 512 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 FZD5Q13467 585 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 INTS6LQ5JSJ4 861 aaKnown RBP19.24■□□□□ 0.67
USF2-202ENST00000343550 FAM171BQ6P995 826 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 TTC9BQ8N6N2 239 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 SHKBP1Q8TBC3 707 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 PI4K2AQ9BTU6 479 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
USF2-202ENST00000343550 LRRC3Q9BY71 257 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 DNAJC25Q9H1X3 360 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 ZNF334Q9HCZ1 680 aaPredicted RBP19.24■□□□□ 0.67
USF2-202ENST00000343550 TRPV5Q9NQA5 729 aa19.24■□□□□ 0.67
USF2-202ENST00000343550 NME7Q9Y5B8 376 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms