RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 LOC100653049A0A140TA62 436 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 B2RBV5 119 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 ASAP2O43150 1006 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 KRT34O76011 436 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 CDC25CP30307 473 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 DNALI1O14645 258 aaPredicted RBP17.11■□□□□ 0.33
RDX-201ENST00000343115 SNX3O60493 162 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 ZWINTO95229 277 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 NPTXRO95502 500 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 GLRA2P23416 452 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 GOLGA7BQ2TAP0 167 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 LRRC6Q86X45 466 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 DSG3P32926 999 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 RFC1P35251 1148 aaPredicted RBP17.11■□□□□ 0.33
RDX-201ENST00000343115 KCNJ2P63252 427 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 PLCB4Q15147 1175 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 CEP120Q8N960 986 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 RXFP2Q8WXD0 754 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 THTPAQ9BU02 230 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 TRIM33Q9UPN9 1127 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
RDX-201ENST00000343115 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
RDX-201ENST00000343115 NUP98P52948 1817 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 DRG2P55039 364 aaKnown RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 ZBTB41Q5SVQ8 909 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 CDKL3Q8IVW4 592 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 TEX2Q8IWB9 1127 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 AVENQ9NQS1 362 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 USP18Q9UMW8 372 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 A0A087WZ62 844 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 H3BRJ5 948 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 GIPC1O14908 333 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 CBX6O95503 412 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 NUDT17P0C025 328 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 PRPSAP1Q14558 356 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 CHST13Q8NET6 341 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 KAT2BQ92831 832 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 EXT2Q93063 718 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 CCDC97Q96F63 343 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 MBOAT7Q96N66 472 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 SLC5A4Q9NY91 659 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 ATP6V1G2O95670 118 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 MORF4L2Q15014 288 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 ZACNQ401N2 412 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 AGGF1Q8N302 714 aaeCLIP17.1■□□□□ 0.331e-5■■■■□ 19.6
RDX-201ENST00000343115 RIBC1Q8N443 379 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 CEP41Q9BYV8 373 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 SNRPAP09012 282 aaKnown RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 ADRA1DP25100 572 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 ELK3P41970 407 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 PTK6Q13882 451 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 SH2D4BQ5SQS7 431 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 SLC26A7Q8TE54 656 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 ART4Q93070 314 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 AP5M1Q9H0R1 490 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 LRRC19Q9H756 370 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 BFARQ9NZS9 450 aa17.1■□□□□ 0.33
RDX-201ENST00000343115 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
RDX-201ENST00000343115 DYNC1LI2O43237 492 aaPredicted RBP17.09■□□□□ 0.33
RDX-201ENST00000343115 ADCY3O60266 1144 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 PYGBP11216 843 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 CCND1P24385 295 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 ALDH5A1P51649 535 aaPredicted RBP17.09■□□□□ 0.33
RDX-201ENST00000343115 ARPP19P56211 112 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 CHI3L2Q15782 390 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 MPZL3Q6UWV2 235 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
RDX-201ENST00000343115 SLFN11Q7Z7L1 901 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 AFAP1L2Q8N4X5 818 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 MTFR1LQ9H019 292 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 FSCN2O14926 492 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 ZNF862O60290 1169 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 TRPA1O75762 1119 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 STX3Q13277 289 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 KIZQ2M2Z5 673 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 TAF1BQ53T94 588 aaPredicted RBP17.09■□□□□ 0.33
RDX-201ENST00000343115 DCAF12L1Q5VU92 463 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 CNPY4Q8N129 248 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 TCP10LQ8TDR4 215 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 PAK5Q9P286 719 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
RDX-201ENST00000343115 FKBP1AP62942 108 aaKnown RBP17.09■□□□□ 0.33
RDX-201ENST00000343115 CAPRIN2Q6IMN6 1127 aaKnown RBP17.09■□□□□ 0.33
RDX-201ENST00000343115 RGS9BPQ6ZS82 235 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms