RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ANGPTL3Q9Y5C1 460 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 GOLGA8CPA6NN73 597 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 DNALI1O14645 258 aaPredicted RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 PGK2P07205 417 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SERPINB4P48594 390 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SULT1E1P49888 294 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 TSPY1Q01534 308 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 WDR49Q8IV35 697 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 AKT1S1Q96B36 256 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SDCCAG3Q96C92 435 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 BAG5Q9UL15 447 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 C3orf70A6NLC5 250 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 ADCY3O60266 1144 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 CYP2C9P11712 490 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 FKBP1AP62942 108 aaKnown RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 ACOT1Q86TX2 421 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 RASSF3Q86WH2 238 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 NSL1Q96IY1 281 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 UBIAD1Q9Y5Z9 338 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 F8VP50 259 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 NPM3O75607 178 aaKnown RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 LCA5LO95447 670 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SHBGP04278 402 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 DSG3P32926 999 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 ESRRGP62508 458 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 FMO1Q01740 532 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 DEUP1Q05D60 604 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 AUHQ13825 339 aaKnown RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 PDK1Q15118 436 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 GOLGA7BQ2TAP0 167 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 DNAL1Q4LDG9 190 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 GLRA4Q5JXX5 417 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 METTL7BQ6UX53 244 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 PDZD8Q8NEN9 1154 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 RXFP2Q8WXD0 754 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 DNAJC9Q8WXX5 260 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 PLEKHA5Q9HAU0 1116 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 DNPEPQ9ULA0 475 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 UBR1Q8IWV7 1749 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SPRP35270 261 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 PRAMEP78395 509 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 CNTN2Q02246 1040 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 KIAA1841Q6NSI8 718 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 ZPBP2Q6X784 338 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 RNF135Q8IUD6 432 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 CCDC60Q8IWA6 550 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 BRSK2Q8IWQ3 736 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 THEM5Q8N1Q8 247 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 TRIML2Q8N7C3 387 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 ZNF669Q96BR6 464 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 KIAA1257Q9ULG3 409 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 FAF1Q9UNN5 650 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 BCL9LQ86UU0 1499 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 CXCL8P10145 99 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 HSPA8P11142 646 aaKnown RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 SSTR1P30872 391 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 CHI3L2Q15782 390 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 KDELC2Q7Z4H8 507 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 FUKQ8N0W3 1084 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 TTC8Q8TAM2 541 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SHISA4Q96DD7 197 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 ADA2Q9NZK5 511 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 PCYOX1Q9UHG3 505 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 NVLO15381 856 aaKnown RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 KLC1Q07866 573 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 RRP1BQ14684 758 aaKnown RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 LRRC36Q1X8D7 754 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 BTBD8Q5XKL5 378 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 DEFB132Q7Z7B7 95 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SLC26A11Q86WA9 606 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 OR6J1Q8NGC5 347 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SUDS3Q9H7L9 328 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
VCAN-202ENST00000342785 E2F8A0AVK6 867 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SRRM3A6NNA2 597 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 CHEK2O96017 543 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 STAG3L1P0CL83 205 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 GHRP10912 638 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 GCLCP48506 637 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 CDC42EP1Q00587 391 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 EFHC1Q5JVL4 640 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 PALB2Q86YC2 1186 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 USP33Q8TEY7 942 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 FRMD8P1Q9BZ68 369 aaPredicted RBP7.5□□□□□ -1.21
VCAN-202ENST00000342785 THEGQ9P2T0 379 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 SUN2Q9UH99 717 aa7.5□□□□□ -1.21
VCAN-202ENST00000342785 NCANO14594 1321 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 FSBPO95073 299 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 POLBP06746 335 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 CYP2C8P10632 490 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 GNL1P36915 607 aaPredicted RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 SPDYCQ5MJ68 293 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 ERMARDQ5T6L9 678 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 ANO5Q75V66 913 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 SH3GL2Q99962 352 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 NEMP1O14524 444 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 NUDT17P0C025 328 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 RFC1P35251 1148 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms