RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 MYL4P12829 197 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 ALOX15P16050 662 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 MTM1Q13496 603 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 RFX8Q6ZV50 586 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 BTN2A2Q8WVV5 523 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 PHF21AQ96BD5 680 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 OSMRQ99650 979 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 FOXP3Q9BZS1 431 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 TUT1Q9H6E5 874 aaKnown RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 CAPN10Q9HC96 672 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 PXMP2Q9NR77 195 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 SLC12A8A0AV02 714 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 PJA2O43164 708 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 SNRPAP09012 282 aaKnown RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 CDH2P19022 906 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 HERVK_113P62684 666 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 ZBTB17Q13105 803 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 MKRN4PQ13434 485 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 CCDC85BQ15834 202 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 IFNEQ86WN2 208 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 PPCSQ9HAB8 311 aa15.61■□□□□ 0.09
UBE3B-202ENST00000342494 MARCOQ9UEW3 520 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-202ENST00000342494 TBKBP1A7MCY6 615 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ZNF286BP0CG31 522 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ACADMP11310 421 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 LHX1P48742 406 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ZNF284Q2VY69 593 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 GJB7Q6PEY0 223 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 MTG1Q9BT17 334 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 TMEM39AQ9NV64 488 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 SPACA6W5XKT8 324 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 MYO1GB0I1T2 1018 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 SOAT2O75908 522 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ENO1P06733 434 aaKnown RBP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 GARTP22102 1010 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 CENPCQ03188 943 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 METTL7BQ6UX53 244 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 EFL1Q7Z2Z2 1120 aaKnown RBP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 PLA2G4CQ9UP65 541 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ENDOD1O94919 500 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 PTPN7P35236 360 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 PLA2G4AP47712 749 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 NPTX2P47972 431 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 TROAPQ12815 778 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 MDH1BQ5I0G3 518 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 MRNIPQ6NTE8 343 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ITIH5Q86UX2 942 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 PCYOX1LQ8NBM8 494 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 TCP11X1B4DZS4 312 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ENO3P13929 434 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 WEE1P30291 646 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 SREBF1P36956 1147 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 FXR1P51114 621 aaKnown RBP eCLIP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 PDIA6Q15084 440 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 NFE2Q16621 373 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 CBWD2Q8IUF1 395 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 GMCL1P1Q8NEA9 526 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 ACSF2Q96CM8 615 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-202ENST00000342494 CYFIP2Q96F07 1278 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 EHD4Q9H223 541 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 MAN1C1Q9NR34 630 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 SETD4Q9NVD3 440 aa15.6■□□□□ 0.09
UBE3B-202ENST00000342494 A0A087WZ62 844 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 FAM107AO95990 144 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 BCAT1P54687 386 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PCNX4Q63HM2 1172 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 ACAD10Q6JQN1 1059 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 MOXD1Q6UVY6 613 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PNKPQ96T60 521 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 FDXACB1Q9BRP7 624 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 SCUBE2Q9NQ36 999 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 KANSL3Q9P2N6 904 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CDYLQ9Y232 598 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 HDAC4P56524 1084 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 TMED1Q13445 227 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 SPATA21Q7Z572 469 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 STAMBPL1Q96FJ0 436 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 WDR24Q96S15 920 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 QRICH2Q9H0J4 1663 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CASTOR2A6NHX0 329 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 SRP72O76094 671 aaKnown RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 PGM1P36871 562 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 FDFT1P37268 417 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 MAGEA4P43358 317 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 NBPF20Q3BBV1 942 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 JAMLQ86YT9 394 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.59■□□□□ 0.094e-7■■■■■ 58.1
UBE3B-202ENST00000342494 RUBCNQ92622 972 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 EPC1Q9H2F5 836 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 H2AFY2Q9P0M6 372 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CHORDC1Q9UHD1 332 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 NEXMIFQ5QGS0 1516 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-202ENST00000342494 VWA5AO00534 786 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CXCL11O14625 94 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 RHOCP08134 193 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 CKBP12277 381 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 TRIM65Q6PJ69 517 aa15.59■□□□□ 0.09
UBE3B-202ENST00000342494 HERC6Q8IVU3 1022 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms