RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 PTGER2P43116 358 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 SATB1Q01826 763 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 ZNF177Q13360 481 aaPredicted RBP20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 FAM172AQ8WUF8 416 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 TFB1MQ8WVM0 346 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 CNPY3Q9BT09 278 aa20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 PPARGC1AQ9UBK2 798 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-201ENST00000341697 GSTA4O15217 222 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 STIP1P31948 543 aaKnown RBP20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 COILP38432 576 aaPredicted RBP20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 SESN3P58005 492 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 TWF1Q12792 350 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 CDH18Q13634 790 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 ERP44Q9BS26 406 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 MRPL9Q9BYD2 267 aaKnown RBP20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 SLC30A1Q9Y6M5 507 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 ANKRD63C9JTQ0 380 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 NDST1P52848 882 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 SHROOM1Q2M3G4 852 aaPredicted RBP20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 REXO1L1PQ8IX06 675 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 FAM71DQ8N9W8 422 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 C9orf72Q96LT7 481 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 PACSIN1Q9BY11 444 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 A0A1B0GUA9 196 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 USP2O75604 605 aaPredicted RBP20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 GLRA2P23416 452 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 ARHGAP20Q9P2F6 1191 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 MROH7Q68CQ1 1323 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 H0Y626 953 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 TMC7Q7Z402 723 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 SLFN11Q7Z7L1 901 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 ANKRD23Q86SG2 305 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 IPMKQ8NFU5 416 aa20.44■□□□□ 0.86
SEMA6C-201ENST00000341697 LRRIQ3A6PVS8 624 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 F5H5T6 163 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 SMIM24O75264 130 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 MAFO75444 373 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 MBL2P11226 248 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 FUT2Q10981 343 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 ETNPPLQ8TBG4 499 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 FRMD8P1Q9BZ68 369 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 OLA1Q9NTK5 396 aaKnown RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 TIMM13Q9Y5L4 95 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 SMIM10L2AP0DMW4 78 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 SMIM10L2BP0DMW5 78 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 ARHGEF7Q14155 803 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 FSCBQ5H9T9 825 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 CCNI2Q6ZMN8 369 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 THOC1Q96FV9 657 aaKnown RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 AFF4Q9UHB7 1163 aaKnown RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 CCDC195A0A1B0GUA6 201 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 ATP9AO75110 1047 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 SPAG6O75602 509 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 PGK1P00558 417 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 ETFBP38117 255 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 FNTAP49354 379 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 EPHB3P54753 998 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 NAPEPLDQ6IQ20 393 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 PTPRN2Q92932 1015 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 PBXIP1Q96AQ6 731 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 HAUS8Q9BT25 410 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 Q9H521 79 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 A0A0A6YYK5 440 aaPredicted RBP20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 CKMP06732 381 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 IMPG1Q17R60 797 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 ZNF606Q8WXB4 792 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 AIPL1Q9NZN9 384 aa20.43■□□□□ 0.86
SEMA6C-201ENST00000341697 CFLARO15519 480 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 FKTNO75072 461 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 TKTL1P51854 596 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 ZNF280AP59817 542 aaPredicted RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 FAM110CQ1W6H9 321 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 MMGT1Q8N4V1 131 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 SERPINI1Q99574 410 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 ADAM21Q9UKJ8 722 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 CDH16O75309 829 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 C1QBPQ07021 282 aaKnown RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 EFHD1Q9BUP0 239 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 MDM2Q00987 491 aaPredicted RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 BTG3Q14201 252 aaPredicted RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 RABGAP1LQ5R372 815 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 GBP7Q8N8V2 638 aaPredicted RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 ADAM2Q99965 735 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 CELF4Q9BZC1 486 aaKnown RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 TSPAN16Q9UKR8 245 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 SPAG7O75391 227 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 PROSCO94903 275 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 GTF2BQ00403 316 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 ARHGEF19Q8IW93 802 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 SH3KBP1Q96B97 665 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 PPWD1Q96BP3 646 aaKnown RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 FGD4Q96M96 766 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 FRMD8Q9BZ67 464 aaPredicted RBP20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 PPCSQ9HAB8 311 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 VCX3AQ9NNX9 186 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 PCDHB5Q9Y5E4 795 aa20.42■□□□□ 0.86
SEMA6C-201ENST00000341697 SERPINB9P50453 376 aa20.41■□□□□ 0.86
SEMA6C-201ENST00000341697 ITGA8P53708 1063 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms