RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 SCYL3Q8IZE3 742 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 IL31RAQ8NI17 732 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 DCPSQ96C86 337 aaKnown RBP12.43□□□□□ -0.42
RTN3-203ENST00000341307 LRRC27Q9C0I9 530 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 MRPL46Q9H2W6 279 aaKnown RBP12.43□□□□□ -0.42
RTN3-203ENST00000341307 NDE1Q9NXR1 346 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 PRELID1Q9Y255 219 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 PCDHA2Q9Y5H9 948 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 MYH11P35749 1972 aa12.43□□□□□ -0.42
RTN3-203ENST00000341307 TPPPO94811 219 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 GAS8O95995 478 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 ICAM1P05362 532 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 TKTP29401 623 aaKnown RBP12.42□□□□□ -0.42
RTN3-203ENST00000341307 PDK3Q15120 406 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 ANKDD1AQ495B1 522 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 COBLL1Q53SF7 1204 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 ELMSAN1Q6PJG2 1045 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 TPH2Q8IWU9 490 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 TMCO5AQ8N6Q1 288 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 MCUR1Q96AQ8 359 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 COX4I2Q96KJ9 171 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 NSMCE3Q96MG7 304 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 REEP2Q9BRK0 252 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
RTN3-203ENST00000341307 RETREG1Q9H6L5 497 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 ARMCX3Q9UH62 379 aaPredicted RBP12.42□□□□□ -0.42
RTN3-203ENST00000341307 PPM1HQ9ULR3 514 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 CARD8Q9Y2G2 431 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 CENPFP49454 3210 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 SFI1A8K8P3 1242 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 PLA2G6O60733 806 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 STT3AP46977 705 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 BCAP31P51572 246 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 ASPHQ12797 758 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 CEP55Q53EZ4 464 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 CST9Q5W186 159 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 LRRC55Q6ZSA7 311 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 BPHLQ86WA6 291 aaPredicted RBP12.42□□□□□ -0.42
RTN3-203ENST00000341307 RASSF3Q86WH2 238 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 TPCN2Q8NHX9 752 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 CYTH2Q99418 400 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 RUSC1Q9BVN2 902 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 CYLDQ9NQC7 956 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 TAS2R1Q9NYW7 299 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 DKK3Q9UBP4 350 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 TTC7AQ9ULT0 858 aaPredicted RBP12.42□□□□□ -0.42
RTN3-203ENST00000341307 DNM3Q9UQ16 869 aa12.42□□□□□ -0.42
RTN3-203ENST00000341307 GOLGA8TH3BQL2 631 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 C2CD2LO14523 706 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 NDC80O14777 642 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 XPOTO43592 962 aaKnown RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 EDF1O60869 148 aaKnown RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 PSMD10O75832 226 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 NOL4O94818 638 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 VCLP18206 1134 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 FBXL19Q6PCT2 694 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 PEX26Q7Z412 305 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 ADAT2Q7Z6V5 191 aaKnown RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 SLFN11Q7Z7L1 901 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 SULF1Q8IWU6 871 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 SCFD1Q8WVM8 642 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 CLEC4DQ8WXI8 215 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 MAELQ96JY0 434 aaKnown RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 WRNIP1Q96S55 665 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 TTC1Q99614 292 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 ZNF577Q9BSK1 485 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 EDEM3Q9BZQ6 932 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 GRIP2Q9C0E4 1043 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 ARMC7Q9H6L4 198 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 RPAP3Q9H6T3 665 aaPredicted RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 PLGRKTQ9HBL7 147 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 NKIRAS1Q9NYS0 192 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 WRAP73Q9P2S5 460 aaPredicted RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 C15orf38-AP3S2A0A0A6YYH1 394 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 F8W8V4 182 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 ZWINTO95229 277 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 CLPTM1O96005 669 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 FUCA1P04066 466 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 ITGB5P18084 799 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 PPP1R2P41236 205 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 PTGIRP43119 386 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 ENTPD1P49961 510 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 IL9RQ01113 521 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 CD300CQ08708 224 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 CYTH1Q15438 398 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 MAN2A1Q16706 1144 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 PLEKHG4Q58EX7 1191 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 ARPINQ7Z6K5 226 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 PPP4R1Q8TF05 950 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms