RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CSH1P0DML2 217 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 CSH2P0DML3 217 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 CDC25CP30307 473 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 ASPAP45381 313 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 UNC93AQ86WB7 457 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 ELMO3Q96BJ8 720 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 MCRS1Q96EZ8 462 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 PCED1BQ96HM7 432 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 BCO2Q9BYV7 579 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 GPR88Q9GZN0 384 aa20.45■□□□□ 0.86
SYNE4-202ENST00000340477 UXTQ9UBK9 157 aaPredicted RBP20.45■□□□□ 0.86
SYNE4-202ENST00000340477 GRIK1P39086 918 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 FMO5P49326 533 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 HTR4Q13639 388 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 CBWD6Q4V339 395 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 CBWD3Q5JTY5 395 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 TMEM31Q5JXX7 168 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 CBWD5Q5RIA9 395 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 TMC8Q8IU68 726 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 CREBRFQ8IUR6 639 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 FAM114A1Q8IWE2 563 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 TCEAL4Q96EI5 215 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 CEP295NLQ96MC4 621 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 MED10Q9BTT4 135 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 ATXN3LQ9H3M9 355 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 DPEP3Q9H4B8 488 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 EHD2Q9NZN4 543 aa20.44■□□□□ 0.86
SYNE4-202ENST00000340477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.44■□□□□ 0.86
SYNE4-202ENST00000340477 A0A1W2PRU2 124 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 P4HA2O15460 535 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 CD58P19256 250 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 BDNFP23560 247 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 GABRR2P28476 465 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 ERCC5P28715 1186 aaPredicted RBP20.43■□□□□ 0.86
SYNE4-202ENST00000340477 NDST1P52848 882 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 YWHAEP62258 255 aaKnown RBP20.43■□□□□ 0.86
SYNE4-202ENST00000340477 SIGLEC14Q08ET2 396 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 TEAD2Q15562 447 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 DDR2Q16832 855 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 CCDC142Q17RM4 750 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 DPCR1Q3MIW9 517 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 CT47A1Q5JQC4 288 aaPredicted RBP20.43■□□□□ 0.86
SYNE4-202ENST00000340477 SDCBP2Q9H190 292 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 FAM124BQ9H5Z6 455 aaPredicted RBP20.43■□□□□ 0.86
SYNE4-202ENST00000340477 APOBEC3GQ9HC16 384 aaKnown RBP20.43■□□□□ 0.86
SYNE4-202ENST00000340477 MAGED2Q9UNF1 606 aaPredicted RBP20.43■□□□□ 0.86
SYNE4-202ENST00000340477 NUMBLQ9Y6R0 609 aa20.43■□□□□ 0.86
SYNE4-202ENST00000340477 ANHXE9PGG2 379 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 AFPP02771 609 aaKnown RBP20.42■□□□□ 0.86
SYNE4-202ENST00000340477 CCR2P41597 374 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 MARSP56192 900 aaKnown RBP20.42■□□□□ 0.86
SYNE4-202ENST00000340477 INCA1Q0VD86 236 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 CCDC183Q5T5S1 534 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 SASS6Q6UVJ0 657 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 ACOT1Q86TX2 421 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 SHKBP1Q8TBC3 707 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 GPR152Q8TDT2 470 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 SEMA4DQ92854 862 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 CNOT6LQ96LI5 555 aaKnown RBP20.42■□□□□ 0.86
SYNE4-202ENST00000340477 NT5C1AQ9BXI3 368 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 ZMYM5Q9UJ78 669 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 DUSP12Q9UNI6 340 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 COQ4Q9Y3A0 265 aa20.42■□□□□ 0.86
SYNE4-202ENST00000340477 SLC38A8A6NNN8 435 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 PMM2O15305 246 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 TBXAS1P24557 533 aaPredicted RBP20.41■□□□□ 0.86
SYNE4-202ENST00000340477 GPR15P49685 360 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 SDHAF4Q5VUM1 108 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 TRIM67Q6ZTA4 783 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 TRIM59Q8IWR1 403 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 SMARCD1Q96GM5 515 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 SPATA17Q96L03 361 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 NT5C1BQ96P26 610 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 LRRC3Q9BY71 257 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 ZNF334Q9HCZ1 680 aaPredicted RBP20.41■□□□□ 0.86
SYNE4-202ENST00000340477 NME7Q9Y5B8 376 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 MYH10P35580 1976 aa20.41■□□□□ 0.86
SYNE4-202ENST00000340477 GPR37L1O60883 481 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 NOL4O94818 638 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 GJA1P17302 382 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 MTIF2P46199 727 aaKnown RBP20.4■□□□□ 0.86
SYNE4-202ENST00000340477 KCNH2Q12809 1159 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 PARM1Q6UWI2 310 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 FAM35AQ86V20 835 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 RSAD2Q8WXG1 361 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 MRPS31Q92665 395 aaKnown RBP20.4■□□□□ 0.86
SYNE4-202ENST00000340477 FGF14Q92915 247 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 SMARCD2Q92925 531 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 TRMT2BQ96GJ1 504 aaKnown RBP20.4■□□□□ 0.86
SYNE4-202ENST00000340477 C8orf48Q96LL4 319 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 B3GNT5Q9BYG0 378 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 ZFP14Q9HCL3 533 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 FBXL21Q9UKT6 434 aa20.4■□□□□ 0.86
SYNE4-202ENST00000340477 NUP210Q8TEM1 1887 aaPredicted RBP20.39■□□□□ 0.86
SYNE4-202ENST00000340477 FAM86C2PA6NEL3 165 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 TMEM221A6NGB7 291 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 M0R296 226 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 CILPO75339 1184 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 ECI2O75521 394 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 SRFP11831 508 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms