RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CFAP99D6REC4 459 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 ESRRBO95718 433 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 STX2P32856 288 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 ICAM3P32942 547 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 NUMBP49757 651 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 ARL4CP56559 192 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 ZNF211Q13398 564 aaPredicted RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 MEI1Q5TIA1 1274 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 CNKSR3Q6P9H4 555 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 KCNN4O15554 427 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 OR1D2P34982 312 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 TTC19Q6DKK2 380 aaPredicted RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 CLEC4DQ8WXI8 215 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 EDEM1Q92611 657 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 CLDND1Q9NY35 253 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 SHPRHQ149N8 1683 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 NCAM2O15394 837 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 HDCP19113 662 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 TPD52P55327 224 aaPredicted RBP13.41□□□□□ -0.26
LIN54-201ENST00000340417 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 RCOR2Q8IZ40 523 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 TBC1D19Q8N5T2 526 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 Q9Y3F1 56 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 INSL6Q9Y581 213 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 ETF1P62495 437 aaKnown RBP13.41□□□□□ -0.26
LIN54-201ENST00000340417 PDK1Q15118 436 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 DSG4Q86SJ6 1040 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 CACUL1Q86Y37 369 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 SUSD6Q92537 303 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 NFKBIZQ9BYH8 718 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 VPS18Q9P253 973 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 MTA1Q13330 715 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 UGCGQ16739 394 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 CDT1Q9H211 546 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 GOLGA8MH3BSY2 632 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 GPC4O75487 556 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 FGF19O95750 216 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
LIN54-201ENST00000340417 TUSC3Q13454 348 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 TPGS1Q6ZTW0 290 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 PNMA5Q96PV4 448 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 ACO2Q99798 780 aaKnown RBP13.41□□□□□ -0.26
LIN54-201ENST00000340417 SLC27A5Q9Y2P5 690 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 ALS2Q96Q42 1657 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 CBX4O00257 560 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 RHOAP61586 193 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 SGCGQ13326 291 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 TMED2Q15363 201 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 KLHDC7AQ5VTJ3 777 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 SLC2A14Q8TDB8 520 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 ERLEC1Q96DZ1 483 aa13.41□□□□□ -0.26
LIN54-201ENST00000340417 DDX23Q9BUQ8 820 aaKnown RBP13.41□□□□□ -0.26
LIN54-201ENST00000340417 TTC7AQ9ULT0 858 aaPredicted RBP13.41□□□□□ -0.26
LIN54-201ENST00000340417 KDM1AO60341 852 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 SLC25A41Q8N5S1 370 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 PDZD8Q8NEN9 1154 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 PPP1R2P1Q96PQ5 205 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 CLCA2Q9UQC9 943 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 FIS1Q9Y3D6 152 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 ABHD14A-ACY1A0A1B0GW23 586 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 CCL16O15467 120 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 SLC12A3P55017 1021 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 ADIGQ0VDE8 80 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 OOSP2Q86WS3 158 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 TTC8Q8TAM2 541 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 ARHGAP39Q9C0H5 1083 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 SYF2O95926 243 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 PFKMP08237 780 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 CCR1P32246 355 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 RFC2P35250 354 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.26
LIN54-201ENST00000340417 CAPN11Q9UMQ6 739 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 PKP3Q9Y446 797 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 TAC1P20366 129 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 PSMD6Q15008 389 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 KIAA1324Q6UXG2 1013 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 MTMR9Q96QG7 549 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 NXF3Q9H4D5 531 aaKnown RBP13.4□□□□□ -0.26
LIN54-201ENST00000340417 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 TSPAN16Q9UKR8 245 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 GLI3P10071 1580 aa13.4□□□□□ -0.26
LIN54-201ENST00000340417 B4GALT5O43286 388 aa13.4□□□□□ -0.27
LIN54-201ENST00000340417 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.27
LIN54-201ENST00000340417 HECTD3Q5T447 861 aa13.4□□□□□ -0.27
LIN54-201ENST00000340417 DENND5BQ6ZUT9 1274 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms