RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 PARP6Q2NL67 630 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 MUM1Q2TAK8 710 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 RAB6CQ53S08 254 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 TMEM154Q6P9G4 183 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 CCDC60Q8IWA6 550 aaPredicted RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 C4orf19Q8IY42 314 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 SCYL3Q8IZE3 742 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 MAIP1Q8WWC4 291 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 RAB6CQ9H0N0 254 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 POLR3FQ9H1D9 316 aaPredicted RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 PSMC3IPQ9P2W1 217 aaPredicted RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 MARCOQ9UEW3 520 aaPredicted RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 ACTL7BQ9Y614 415 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 WNT10BO00744 389 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 COQ9O75208 318 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 DCTN3O75935 186 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 IL1R2P27930 398 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 OTUD4Q01804 1114 aaKnown RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 OASLQ15646 514 aaKnown RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 HIF1AQ16665 826 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 ZACNQ401N2 412 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 LIN9Q5TKA1 542 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 PLEKHA7Q6IQ23 1121 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 C4orf50Q6ZRC1 276 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 C15orf39Q6ZRI6 1047 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 ACTL9Q8TC94 416 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 DNAJC9Q8WXX5 260 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 CPT1BQ92523 772 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 SENP7Q9BQF6 1050 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 TARS2Q9BW92 718 aaKnown RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 ST6GALNAC4Q9H4F1 302 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.56□□□□□ -0.4
CCDC144CP-201ENST00000340196 FAM237BA0A1B0GVD1 139 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 PIK3R2O00459 728 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 ABHD2P08910 425 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 WEE2P0C1S8 567 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 AMPD1P23109 780 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 ALDH3A1P30838 453 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 TNFSF9P41273 254 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 DCUN1D2Q6PH85 259 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 KBTBD2Q8IY47 623 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 PYROXD1Q8WU10 500 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 ZNF606Q8WXB4 792 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 MYOZ2Q9NPC6 264 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 LRRC42Q9Y546 428 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 hCG_1818297A0A087WSY0 165 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 WDR64B1ANS9 1081 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 PMM2O15305 246 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 PEX10O60683 326 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 TBX10O75333 385 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 KITP10721 976 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 NEFHP12036 1026 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 PTPN4P29074 926 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 CETN2P41208 172 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 BASP1P80723 227 aaKnown RBP12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 USP4Q13107 963 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 SEPT7Q16181 437 aaKnown RBP12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 CCDC6Q16204 474 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 CDHR3Q6ZTQ4 885 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 CDR2LQ86X02 465 aaPredicted RBP12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 UNC45BQ8IWX7 931 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 KIAA0319LQ8IZA0 1049 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 SLC25A41Q8N5S1 370 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 PDCD2LQ9BRP1 358 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 TMEM120AQ9BXJ8 343 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 LMCD1Q9NZU5 365 aa12.55□□□□□ -0.4
CCDC144CP-201ENST00000340196 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 LRRIQ4A6NIV6 560 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 SMAPO00193 183 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 CAPN9O14815 690 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 ALOX15BO15296 676 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 ATP6V1C1P21283 382 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 MARK3P27448 753 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 CCNG1P51959 295 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 VCPP55072 806 aaKnown RBP12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 GEMIN4P57678 1058 aaKnown RBP12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 MXRA7P84157 204 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 RCN2Q14257 317 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 FAXCQ5TGI0 409 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 SNX30Q5VWJ9 437 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 CES4AQ5XG92 561 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 NPNTQ6UXI9 565 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 CENPUQ71F23 418 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 RELL1Q8IUW5 271 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 CCDC33Q8N5R6 958 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 JOSD2Q8TAC2 188 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 KCNK13Q9HB14 408 aa12.54□□□□□ -0.4
CCDC144CP-201ENST00000340196 RBAKQ9NYW8 714 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms