RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 GBP6Q6ZN66 633 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 WHAMMQ8TF30 809 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 ELOVL4Q9GZR5 314 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
SRSF3-201ENST00000339436 CEP72Q9P209 647 aa13.69□□□□□ -0.22
SRSF3-201ENST00000339436 CAVIN2O95810 425 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 CYP2F1P24903 491 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 MAGEA11P43364 429 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 ALDH1A3P47895 512 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 EPHB3P54753 998 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
SRSF3-201ENST00000339436 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 ZP2Q05996 745 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 IQCB1Q15051 598 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 GRASPQ7Z6J2 395 aaPredicted RBP13.68□□□□□ -0.22
SRSF3-201ENST00000339436 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 CRYBG2Q8N1P7 616 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 ELMOD1Q8N336 334 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 UBR7Q8N806 425 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 ANKRD20A12PQ8NF67 263 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 PHF7Q9BWX1 381 aaPredicted RBP13.68□□□□□ -0.22
SRSF3-201ENST00000339436 HCFC1R1Q9NWW0 138 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
SRSF3-201ENST00000339436 LIMA1Q9UHB6 759 aaKnown RBP13.68□□□□□ -0.22
SRSF3-201ENST00000339436 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
SRSF3-201ENST00000339436 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
SRSF3-201ENST00000339436 TPM2P07951 284 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 TRIM21P19474 475 aaKnown RBP13.67□□□□□ -0.22
SRSF3-201ENST00000339436 BDNFP23560 247 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 PON1P27169 355 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 PABPC1LQ4VXU2 614 aaKnown RBP13.67□□□□□ -0.22
SRSF3-201ENST00000339436 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 APTXQ7Z2E3 356 aaKnown RBP13.67□□□□□ -0.22
SRSF3-201ENST00000339436 FAM35AQ86V20 835 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 ADHFE1Q8IWW8 467 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 KAT5Q92993 513 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 PSMG2Q969U7 264 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 B3GNT5Q9BYG0 378 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 ZNF518BQ9C0D4 1074 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 FAM49BQ9NUQ9 324 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 DNMT3BQ9UBC3 853 aaKnown RBP13.67□□□□□ -0.22
SRSF3-201ENST00000339436 APEX2Q9UBZ4 518 aa13.67□□□□□ -0.22
SRSF3-201ENST00000339436 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 BECN2A8MW95 431 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 RHOP08100 348 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 CCDC130P13994 396 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 SLC9A1P19634 815 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 ACO1P21399 889 aaKnown RBP13.66□□□□□ -0.22
SRSF3-201ENST00000339436 GPR15P49685 360 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 COPB1P53618 953 aaKnown RBP13.66□□□□□ -0.22
SRSF3-201ENST00000339436 RAD23BP54727 409 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 EPHA5P54756 1037 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 NTHL1P78549 312 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 VEPH1Q14D04 833 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 IQCEQ6IPM2 695 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 SLC4A11Q8NBS3 891 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 DNAI2Q9GZS0 605 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 VPS16Q9H269 839 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 SIX2Q9NPC8 291 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
SRSF3-201ENST00000339436 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 TMEM30AQ9NV96 361 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 ATP8B3O60423 1300 aa13.66□□□□□ -0.22
SRSF3-201ENST00000339436 CLDN5O00501 218 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 PTPN2P17706 415 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
SRSF3-201ENST00000339436 FSHRP23945 695 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 CACNA2D1P54289 1103 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
SRSF3-201ENST00000339436 APBA1Q02410 837 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 PAQR9Q6ZVX9 377 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 GET4Q7L5D6 327 aaPredicted RBP13.65□□□□□ -0.22
SRSF3-201ENST00000339436 ENOSF1Q7L5Y1 443 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 ITIH5Q86UX2 942 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 TMC8Q8IU68 726 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 LEMD2Q8NC56 503 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 SLC2A14Q8TDB8 520 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 SMARCD1Q96GM5 515 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 TMEM176AQ96HP8 235 aa13.65□□□□□ -0.22
SRSF3-201ENST00000339436 FAM81BQ96LP2 452 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms