RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 A6NJR5 290 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 GOLGA8SH3BPF8 625 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 B4GALT5O43286 388 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 CALB1P05937 261 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 HOXD8P13378 290 aaPredicted RBP17.2■□□□□ 0.34
LITAF-201ENST00000339430 CETN2P41208 172 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 IGBP1P78318 339 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 TRIM32Q13049 653 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 ORC1Q13415 861 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 IER5Q5VY09 327 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 PIGWQ7Z7B1 504 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 ZBTB8OSQ8IWT0 167 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 TMEM35BQ8NCS4 154 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 GDAP1Q8TB36 358 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 CCT6BQ92526 530 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 RBM41Q96IZ5 413 aaKnown RBP17.2■□□□□ 0.34
LITAF-201ENST00000339430 RBM15Q96T37 977 aaKnown RBP eCLIP17.2■□□□□ 0.34
LITAF-201ENST00000339430 TJP2Q9UDY2 1190 aa17.2■□□□□ 0.34
LITAF-201ENST00000339430 CPSF3Q9UKF6 684 aaKnown RBP17.2■□□□□ 0.34
LITAF-201ENST00000339430 ASAP2O43150 1006 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 INSRRP14616 1297 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 SCTRP47872 440 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 HIBCHQ6NVY1 386 aaPredicted RBP17.19■□□□□ 0.34
LITAF-201ENST00000339430 SPOCD1Q6ZMY3 1216 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 ERICH1Q86X53 443 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 SAMD15Q9P1V8 674 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 ANK1P16157 1881 aa17.19■□□□□ 0.34
LITAF-201ENST00000339430 TCRBV5S1A1TA0A578 114 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 LRRD1A4D1F6 860 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 GPR25O00155 361 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 ABLIM1O14639 778 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 KRT19P08727 400 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 AKR1A1P14550 325 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 BRAFP15056 766 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 ELNP15502 786 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 ARSEP51690 589 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 AP3M2P53677 418 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 TMEM192Q8IY95 271 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 ANKS4BQ8N8V4 417 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
LITAF-201ENST00000339430 CCDC134Q9H6E4 229 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 ACTR5Q9H9F9 607 aaPredicted RBP17.18■□□□□ 0.34
LITAF-201ENST00000339430 PPME1Q9Y570 386 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 TCP11X1B4DZS4 312 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 TJP3O95049 919 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 CYBAP13498 195 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 CD19P15391 556 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 MCL1Q07820 350 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 MPP2Q14168 576 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 SMTNL2Q2TAL5 461 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 EEF1DP3Q658K8 133 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 CDCA2Q69YH5 1023 aaPredicted RBP17.18■□□□□ 0.34
LITAF-201ENST00000339430 PPP1R2P3Q6NXS1 205 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 DENND1BQ6P3S1 775 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 CAPN12Q6ZSI9 719 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 SRRM1Q8IYB3 904 aaKnown RBP17.18■□□□□ 0.34
LITAF-201ENST00000339430 BBOF1Q8ND07 529 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 AP5M1Q9H0R1 490 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 SAYSD1Q9NPB0 183 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 NAALADL1Q9UQQ1 740 aa17.18■□□□□ 0.34
LITAF-201ENST00000339430 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.18■□□□□ 0.34
LITAF-201ENST00000339430 CCT8L1PA6NM43 557 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 ATP5DP30049 168 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 MAGEA4P43358 317 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 ASPAP45381 313 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 DYNLT1P63172 113 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 BEX3Q00994 111 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 GPS1Q13098 491 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 SLC40A1Q9NP59 571 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 HAUS2Q9NVX0 235 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 SAE1Q9UBE0 346 aaPredicted RBP17.17■□□□□ 0.34
LITAF-201ENST00000339430 SRRDQ9UH36 339 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 GGT7Q9UJ14 662 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 IGKV6-21A0A0C4DH24 114 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
LITAF-201ENST00000339430 LSM8O95777 96 aaKnown RBP17.17■□□□□ 0.34
LITAF-201ENST00000339430 CLCN3P51790 818 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 CDH8P55286 799 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 MXD4Q14582 209 aaPredicted RBP17.17■□□□□ 0.34
LITAF-201ENST00000339430 FASTKD3Q14CZ7 662 aaKnown RBP17.17■□□□□ 0.34
LITAF-201ENST00000339430 ZNF484Q5JVG2 852 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 TCP11Q8WWU5 503 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 PPP1R16BQ96T49 567 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 XYLT2Q9H1B5 865 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 C10orf88Q9H8K7 445 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 ZWILCHQ9H900 591 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 FGFR1OP2Q9NVK5 253 aa17.17■□□□□ 0.34
LITAF-201ENST00000339430 hCG_1818297A0A087WSY0 165 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 DNALI1O14645 258 aaPredicted RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 IFNB1P01574 187 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 CXCL8P10145 99 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 RFC1P35251 1148 aaPredicted RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 CACNB2Q08289 660 aaPredicted RBP17.16■□□□□ 0.34
LITAF-201ENST00000339430 TMED2Q15363 201 aa17.16■□□□□ 0.34
LITAF-201ENST00000339430 KCNT1Q5JUK3 1230 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms