RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CEP41Q9BYV8 373 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 NMUR2Q9GZQ4 415 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 MIS12Q9H081 205 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 RANBP17Q9H2T7 1088 aaKnown RBP14.81□□□□□ -0.04
PCDH8-201ENST00000338862 KCND2Q9NZV8 630 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 TJP2Q9UDY2 1190 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 NUB1Q9Y5A7 615 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 TCRBV7S3A2A0A539 114 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 PEX10O60683 326 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 ZBED1O96006 694 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 SNRNP48Q6IEG0 339 aaKnown RBP14.81□□□□□ -0.04
PCDH8-201ENST00000338862 ANO5Q75V66 913 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 ABRAQ8N0Z2 381 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 PTPRN2Q92932 1015 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 INPP5FQ9Y2H2 1132 aa14.81□□□□□ -0.04
PCDH8-201ENST00000338862 DGKIO75912 1065 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 SESN2P58004 480 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 PEX6Q13608 980 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 TAF5Q15542 800 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 KLHL38Q2WGJ6 581 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 ZNF699Q32M78 642 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 ACSBG2Q5FVE4 666 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 TFDP3Q5H9I0 405 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 UNC45BQ8IWX7 931 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 RNF148Q8N7C7 305 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 EXD1Q8NHP7 514 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 ZC3H7BQ9UGR2 993 aaKnown RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 TOGARAM1Q9Y4F4 1720 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 ASTN2O75129 1339 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 ATP6V1B1P15313 513 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 AMPD1P23109 780 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 RFC1P35251 1148 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 GALNTL6Q49A17 601 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 IL31Q6EBC2 164 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 RINLQ6ZS11 566 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 HACE1Q8IYU2 909 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 GMCL1P1Q8NEA9 526 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 ABTB1Q969K4 478 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 TMEM109Q9BVC6 243 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 VPS11Q9H270 941 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 A0A1B0GUL6 1792 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 NEMP1O14524 444 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 CCNE2O96020 404 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 NR3C2P08235 984 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 F7P08709 466 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 LINGO3P0C6S8 592 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 TCN1P20061 433 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 IVDP26440 423 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 MSX2P35548 267 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 CYP1B1Q16678 543 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 MSS51Q4VC12 460 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 LGSNQ5TDP6 509 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 STRIP1Q5VSL9 837 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 TMEM130Q8N3G9 435 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 SYTL5Q8TDW5 730 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 DEPDC1BQ8WUY9 529 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 MASTLQ96GX5 879 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 SLITRK1Q96PX8 696 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 SYT11Q9BT88 431 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 LRMDAQ9H2I8 198 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 CORO1CQ9ULV4 474 aaPredicted RBP14.8□□□□□ -0.04
PCDH8-201ENST00000338862 NR2E3Q9Y5X4 410 aa14.8□□□□□ -0.04
PCDH8-201ENST00000338862 KRT37O76014 449 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 TOP3BO95985 862 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 VCPP55072 806 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 CRADDP78560 199 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 SLC25A3Q00325 362 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 GTF2BQ00403 316 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 TCHHL1Q5QJ38 904 aaPredicted RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 FAM160B2Q86V87 743 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 SLC9A9Q8IVB4 645 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ATG4CQ96DT6 458 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 NENFQ9UMX5 172 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 APBA3O96018 575 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ATP6V1C1P21283 382 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 POLR2BP30876 1174 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ABCG1P45844 678 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 MRPS9P82933 396 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 UBAP2LQ14157 1087 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 SCARA3Q6AZY7 606 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ZNF516Q92618 1163 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 NMD3Q96D46 503 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ADPGKQ9BRR6 497 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 SENP1Q9P0U3 644 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 TMX2Q9Y320 296 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 CCDC88AQ3V6T2 1871 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 M0QYV0 167 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 PSTPIP1O43586 416 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 TBX10O75333 385 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 RPL22P35268 128 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 TNFSF9P41273 254 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 GPC3P51654 580 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 YARSP54577 528 aaKnown RBP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ASPHQ12797 758 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 TRIP10Q15642 601 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 SULF1Q8IWU6 871 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 PPIL6Q8IXY8 311 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 MAB21L3Q8N8X9 362 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms