RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NR2E1Q9Y466 385 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 A0A0U1RQF3 1178 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 SPTLC1O15269 473 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
HPS1-202ENST00000338546 ERBB2P04626 1255 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 INHAP05111 366 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 PLA2G4AP47712 749 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 TAS2R40P59535 323 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 ZNF252P-AS1Q0IIN9 211 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 LPIN1Q14693 890 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 SIX1Q15475 284 aaPredicted RBP17.15■□□□□ 0.34
HPS1-202ENST00000338546 GOLGA7BQ2TAP0 167 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
HPS1-202ENST00000338546 CYP4A22Q5TCH4 519 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 TMEM110Q86TL2 294 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 ACOT1Q86TX2 421 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 TMEM86AQ8N2M4 240 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 GSTCDQ8NEC7 633 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 SPATA18Q8TC71 538 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 MAGOHBQ96A72 148 aaKnown RBP17.15■□□□□ 0.34
HPS1-202ENST00000338546 NCAPGQ9BPX3 1015 aa17.15■□□□□ 0.34
HPS1-202ENST00000338546 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
HPS1-202ENST00000338546 PFKMP08237 780 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 KRT7P08729 469 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 RARAP10276 462 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 RFC1P35251 1148 aaPredicted RBP17.14■□□□□ 0.33
HPS1-202ENST00000338546 SCNN1AP37088 669 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 RPL34P49207 117 aaKnown RBP17.14■□□□□ 0.33
HPS1-202ENST00000338546 CARSP49589 748 aaKnown RBP17.14■□□□□ 0.33
HPS1-202ENST00000338546 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 MREGQ8N565 214 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 ANKRD52Q8NB46 1076 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 SLC35F5Q8WV83 523 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 ERP44Q9BS26 406 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 EFR3BQ9Y2G0 817 aa17.14■□□□□ 0.33
HPS1-202ENST00000338546 INPPL1O15357 1258 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 TTI1O43156 1089 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 PSMA2P25787 234 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 CD52P31358 61 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 GRK4P32298 578 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 COILP38432 576 aaPredicted RBP17.13■□□□□ 0.33
HPS1-202ENST00000338546 TNNT3P45378 269 aaPredicted RBP17.13■□□□□ 0.33
HPS1-202ENST00000338546 MRPS25P82663 173 aaKnown RBP17.13■□□□□ 0.33
HPS1-202ENST00000338546 OGDHQ02218 1023 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 HADHQ16836 314 aaKnown RBP17.13■□□□□ 0.33
HPS1-202ENST00000338546 AGMOQ6ZNB7 445 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 SYDE1Q6ZW31 735 aaPredicted RBP17.13■□□□□ 0.33
HPS1-202ENST00000338546 ADGRF2Q8IZF7 708 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 UBA3Q8TBC4 463 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 IFT81Q8WYA0 676 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 GAD1Q99259 594 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
HPS1-202ENST00000338546 PHF24Q9UPV7 400 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 USTQ9Y2C2 406 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 NME7Q9Y5B8 376 aa17.13■□□□□ 0.33
HPS1-202ENST00000338546 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 F8VP50 259 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 GOLGA8SH3BPF8 625 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 GABRDO14764 452 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 GJB6O95452 261 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 GHRP10912 638 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 PCK1P35558 622 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 MLH1P40692 756 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 PTGIRP43119 386 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 ACADSBP45954 432 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 AARSP49588 968 aaKnown RBP eCLIP17.12■□□□□ 0.33
HPS1-202ENST00000338546 BCAT1P54687 386 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 BST2Q10589 180 aaKnown RBP17.12■□□□□ 0.33
HPS1-202ENST00000338546 KLF1Q13351 362 aaPredicted RBP17.12■□□□□ 0.33
HPS1-202ENST00000338546 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
HPS1-202ENST00000338546 DUPD1Q68J44 220 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 CCDC137Q6PK04 289 aaKnown RBP17.12■□□□□ 0.33
HPS1-202ENST00000338546 ARCQ7LC44 396 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 TTC30AQ86WT1 665 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 ZDHHC14Q8IZN3 488 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 HSFY1Q96LI6 401 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 ZFP42Q96MM3 310 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 OSBPL8Q9BZF1 889 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 ASNSD1Q9NWL6 643 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 NFU1Q9UMS0 254 aa17.12■□□□□ 0.33
HPS1-202ENST00000338546 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 CYB561D2O14569 222 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 FGFR1P11362 822 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 SSR1P43307 286 aaKnown RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 LHX1P48742 406 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 ZNF143P52747 638 aaPredicted RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 ALS2CLQ60I27 953 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 SND1Q7KZF4 910 aaKnown RBP eCLIP17.11■□□□□ 0.33
HPS1-202ENST00000338546 JAMLQ86YT9 394 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 GRK7Q8WTQ7 553 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 ZNF296Q8WUU4 475 aaPredicted RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 UROC1Q96N76 676 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 CNPY3Q9BT09 278 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 STARD7Q9NQZ5 370 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms