RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ORC1Q13415 861 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 RAPGEF1Q13905 1077 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 TAF12Q16514 161 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 AAK1Q2M2I8 961 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 CFAP221Q4G0U5 840 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 ATAT1Q5SQI0 421 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 RARS2Q5T160 578 aaKnown RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 IQCEQ6IPM2 695 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 DPY19L2P1Q6NXN4 242 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 VSTM1Q6UX27 236 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 UBR7Q8N806 425 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 C12orf76Q8N812 135 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 SLC4A11Q8NBS3 891 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 RBBP8NLQ8NC74 664 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 PCED1BQ96HM7 432 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 ZNF512Q96ME7 567 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 TWNKQ96RR1 684 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 SEPT5Q99719 369 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 HNRNPABQ99729 332 aaKnown RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 NUP58Q9BVL2 599 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 HMGXB4Q9UGU5 601 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 CNTN6Q9UQ52 1028 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 ASB3Q9Y575 518 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 INSL5Q9Y5Q6 135 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 BDNFP23560 247 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 CYP2F1P24903 491 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 ANXA13P27216 316 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 GRIK1P39086 918 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 KLK7P49862 253 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 CDR1P51861 262 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 SLC8A3P57103 927 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 PTK2Q05397 1052 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 DLX2Q07687 328 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 TWF1Q12792 350 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 VEPH1Q14D04 833 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 PUS10Q3MIT2 529 aaKnown RBP12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 SYCE2Q6PIF2 218 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 TMC5Q6UXY8 1006 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 ITIH5Q86UX2 942 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 SCN4BQ8IWT1 228 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 C12orf29Q8N999 325 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 SHC3Q92529 594 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 RIPOR3Q96MK2 946 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 SPAG5Q96R06 1193 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 ADAM7Q9H2U9 754 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 FAM50BQ9Y247 325 aa12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
SPTLC1-202ENST00000337841 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 MYO7AQ13402 2215 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 H3BQ06 376 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 RNF225M0QZC1 329 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 CLDN5O00501 218 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 TRIM66O15016 1216 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 CCL16O15467 120 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 MED7O43513 233 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 TBX10O75333 385 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 RFPL2O75678 378 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 NOL4O94818 638 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 VNN2O95498 520 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 POU2F2P09086 479 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 PTPN2P17706 415 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 ADORA2BP29275 332 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 STAT1P42224 750 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 MTHFRP42898 656 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 STILQ15468 1287 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 CNGA2Q16280 664 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 LEXMQ3ZCV2 418 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 ARHGAP17Q68EM7 881 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 GPR149Q86SP6 731 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 FUKQ8N0W3 1084 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 SLC2A14Q8TDB8 520 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 SMG7Q92540 1137 aaKnown RBP12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 C8orf48Q96LL4 319 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 CEP295NLQ96MC4 621 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 NAA15Q9BXJ9 866 aaKnown RBP12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 EDEM3Q9BZQ6 932 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 TRIM5Q9C035 493 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 S1PR5Q9H228 398 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 GANQ9H2C0 597 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 CRISPLD1Q9H336 500 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 NLRC4Q9NPP4 1024 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 FAM49BQ9NUQ9 324 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 CEP72Q9P209 647 aa12.64□□□□□ -0.39
SPTLC1-202ENST00000337841 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms