RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 ZBTB7AO95365 584 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 FOXN2P32314 431 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 YARSP54577 528 aaKnown RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 CENPCQ03188 943 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 EPHA7Q15375 998 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 GSTA3Q16772 222 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SPDYCQ5MJ68 293 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 PRR5LQ6MZQ0 368 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 RYBPQ8N488 228 aaPredicted RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 TUBGCP5Q96RT8 1024 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 CADM1Q9BY67 442 aaKnown RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 FGFBP2Q9BYJ0 223 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 DCLK3Q9C098 648 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 IL1RL2Q9HB29 575 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 NOL4O94818 638 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 MSX2P35548 267 aaPredicted RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 NEK3P51956 506 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SFSWAPQ12872 951 aaKnown RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 GIT2Q14161 759 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 EFTUD2Q15029 972 aaKnown RBP eCLIP13.82□□□□□ -0.26e-7■■■■■ 47.1
COL2A1-201ENST00000337299 SLC1A5Q15758 541 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 PTF1AQ7RTS3 328 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 ZNF333Q96JL9 665 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 FAM20AQ96MK3 541 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SLC4A9Q96Q91 983 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 UBAP1Q9NZ09 502 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SCAF8Q9UPN6 1271 aaKnown RBP13.82□□□□□ -0.2
COL2A1-201ENST00000337299 SNX5Q9Y5X3 404 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 WDR46O15213 610 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RASA1P20936 1047 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RPL5P46777 297 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 IL31Q6EBC2 164 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 DENND5BQ6ZUT9 1274 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 TMCO5AQ8N6Q1 288 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 TMEM79Q9BSE2 394 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 IKZF4Q9H2S9 585 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 TNFAIP8O95379 198 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 BCAR1P56945 870 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 TXNRD3Q86VQ6 643 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RCOR2Q8IZ40 523 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CYP4X1Q8N118 509 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 ZSCAN18Q8TBC5 510 aaPredicted RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RBM46Q8TBY0 533 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 DACT3Q96B18 629 aaPredicted RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RIOK1Q9BRS2 568 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 FAM96AQ9H5X1 160 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RRN3Q9NYV6 651 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 JCADQ9P266 1359 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CYTH3O43739 400 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 DAB1O75553 588 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 GJB6O95452 261 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 NPR1P16066 1061 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 OSBPP22059 807 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 FGFR3P22607 806 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CCDC15Q0P6D6 951 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 MAPK11Q15759 364 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 ART4Q93070 314 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 MAML3Q96JK9 1138 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 SMIM31A0A1B0GVY4 71 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CAPN8A6NHC0 703 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 KPNA7A9QM74 516 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 AMPD1P23109 780 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 NEK2P51955 445 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 DRG2P55039 364 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 DHDDSQ86SQ9 333 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 ZNF554Q86TJ5 538 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 RNF135Q8IUD6 432 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 CCDC33Q8N5R6 958 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 SPATA18Q8TC71 538 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 NMUR2Q9GZQ4 415 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 PARVAQ9NVD7 372 aa13.81□□□□□ -0.2
COL2A1-201ENST00000337299 H0YGN5 161 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 DCXO43602 365 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 KRT3P12035 628 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 ABL2P42684 1182 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 PRELPP51888 382 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 PKNOX1P55347 436 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 MTERF2Q49AM1 385 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 PPIL6Q8IXY8 311 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 CBWD1Q9BRT8 395 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 BEGAINQ9BUH8 593 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 DNAI2Q9GZS0 605 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms