RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SLC1A1P43005 524 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
SNCA-201ENST00000336904 PTK6Q13882 451 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 TFDP1Q14186 410 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 AGBL2Q5U5Z8 902 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 FAM47EQ6ZV65 393 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 KATNAL2Q8IYT4 538 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 FAM71DQ8N9W8 422 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 GPRC5AQ8NFJ5 357 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 BRI3BPQ8WY22 251 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 PEBP4Q96S96 227 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 TRIM56Q9BRZ2 755 aaKnown RBP9.32□□□□□ -0.92
SNCA-201ENST00000336904 NXF3Q9H4D5 531 aaKnown RBP9.32□□□□□ -0.92
SNCA-201ENST00000336904 KCNH4Q9UQ05 1017 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 CEP83Q9Y592 693 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 NME7Q9Y5B8 376 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 H0YHG0 523 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 SNAPC2Q13487 334 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 HIC1Q14526 733 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 PPP2R5EQ16537 467 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 RHBDF2Q6PJF5 856 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 PLPPR4Q7Z2D5 763 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 ARMC9Q7Z3E5 817 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 RFX6Q8HWS3 928 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 ARFGAP2Q8N6H7 521 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 C12orf50Q8NA57 414 aaPredicted RBP9.32□□□□□ -0.92
SNCA-201ENST00000336904 NPLOC4Q8TAT6 608 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNCA-201ENST00000336904 SEC16BQ96JE7 1060 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 CABS1Q96KC9 395 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 C16orf70Q9BSU1 422 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 NGRNQ9NPE2 291 aaKnown RBP9.32□□□□□ -0.92
SNCA-201ENST00000336904 hCG_1818297A0A087WSY0 165 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TCRBV5S1A1TA0A578 114 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 LRRC37A2A6NM11 1700 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TSPAN1O60635 241 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 AVILO75366 819 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ADORA2BP29275 332 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 MIPP30301 263 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CDKN2BP42772 138 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 DRG2P55039 364 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 TMEM132DQ14C87 1099 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 GRIK4Q16099 956 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 GPR162Q16538 588 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CCL14Q16627 93 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 MSS51Q4VC12 460 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ZC3H12AQ5D1E8 599 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 TRIM72Q6ZMU5 477 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CTU1Q7Z7A3 348 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 XYLT1Q86Y38 959 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 UNC45BQ8IWX7 931 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 EIF1ADQ8N9N8 165 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 EXD1Q8NHP7 514 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ATXN2LQ8WWM7 1075 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.31□□□□□ -0.92
SNCA-201ENST00000336904 FGFR1OP2Q9NVK5 253 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 PIH1D1Q9NWS0 290 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 PARP2Q9UGN5 583 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TSPAN16Q9UKR8 245 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CNTN6Q9UQ52 1028 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 NEU2Q9Y3R4 380 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 HEY1Q9Y5J3 304 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ANK1P16157 1881 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TCP11X1B4DZS4 312 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TTC4O95801 387 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CALB1P05937 261 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 SSTR1P30872 391 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 BASP1P80723 227 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 PDIA2Q13087 525 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 SLMAPQ14BN4 828 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 FAM133BQ5BKY9 247 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 PPP6R3Q5H9R7 873 aaPredicted RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 MARCH8Q5T0T0 291 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 MTHFD1LQ6UB35 978 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 FASTKD5Q7L8L6 764 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 TADA2BQ86TJ2 420 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 OR6J1Q8NGC5 347 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 MPHOSPH6Q99547 160 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 ADPGKQ9BRR6 497 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TRAIPQ9BWF2 469 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 C2orf40Q9H1Z8 148 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 RNF39Q9H2S5 420 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ALG13Q9NP73 1137 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 DPP3Q9NY33 737 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 SIP14410 1827 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 WDR91A4D1P6 747 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ASAP2O43150 1006 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CCDC130P13994 396 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 BRAFP15056 766 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 ITIH2P19823 946 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 DRD4P21917 467 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 KLRC2P26717 231 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 MAGEA4P43358 317 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 EIF3BP55884 814 aaKnown RBP9.31□□□□□ -0.92
SNCA-201ENST00000336904 CCNG2Q16589 344 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms