RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 CNGA4Q8IV77 575 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 LRRC8AQ8IWT6 810 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 CRYBG2Q8N1P7 616 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 EDEM3Q9BZQ6 932 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 ZCWPW1Q9H0M4 648 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 IMPACTQ9P2X3 320 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 TSPAN16Q9UKR8 245 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 COL6A3P12111 3177 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 A0A087X0T9 212 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 TMCO5BA8MYB1 307 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 MICAL2O94851 1124 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 FAM228BP0C875 321 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 CTSAP10619 480 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 CYP2F1P24903 491 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 LHX1P48742 406 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 SMAD3P84022 425 aaKnown RBP17.54■□□□□ 0.4
SHOX-201ENST00000334060 GOLGA7BQ2TAP0 167 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 FAM171BQ6P995 826 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 METTL23Q86XA0 190 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 SLC30A5Q8TAD4 765 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 ACBD6Q9BR61 282 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 DESI2Q9BSY9 194 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 PRDM12Q9H4Q4 367 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 TLR9Q9NR96 1032 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 PLXNA3P51805 1871 aa17.54■□□□□ 0.4
SHOX-201ENST00000334060 C2orf71A6NGG8 1288 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 SEC24AO95486 1093 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 CXCL14O95715 111 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 URODP06132 367 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 BDNFP23560 247 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 KRT17Q04695 432 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 GRIN2CQ14957 1233 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 ASTE1Q2TB18 679 aaPredicted RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 ZNF280DQ6N043 979 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 Q7L0L9 218 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 GPRIN1Q7Z2K8 1008 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 UNC93AQ86WB7 457 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 ZMIZ2Q8NF64 920 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 ZNF576Q9H609 170 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 ABI2Q9NYB9 513 aaPredicted RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 ADAMTS1Q9UHI8 967 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 CPB1P15086 417 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 ELAVL2Q12926 359 aaKnown RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 LRIT3Q3SXY7 679 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 C1orf131Q8NDD1 294 aaKnown RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 ZNF397Q8NF99 534 aaPredicted RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 MICAL1Q8TDZ2 1067 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 CPA5Q8WXQ8 436 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 AGPAT1Q99943 283 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 C11orf84Q9BUA3 381 aaPredicted RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 PACSIN1Q9BY11 444 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 NHEJ1Q9H9Q4 299 aaPredicted RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 SEPT11Q9NVA2 429 aaKnown RBP17.53■□□□□ 0.4
SHOX-201ENST00000334060 DSEQ9UL01 958 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 CDH9Q9ULB4 789 aa17.53■□□□□ 0.4
SHOX-201ENST00000334060 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHOX-201ENST00000334060 UQCRHLA0A096LP55 91 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 MTMR11A4FU01 709 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 FSCN2O14926 492 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 PTMAP06454 111 aaKnown RBP17.52■□□□□ 0.4
SHOX-201ENST00000334060 UQCRHP07919 91 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 FERP16591 822 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 PRKCIP41743 596 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 PDE6CP51160 858 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 TOGARAM2Q6ZUX3 1019 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 ANKS3Q6ZW76 656 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 FAM35AQ86V20 835 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 ACRBPQ8NEB7 543 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 FAXDC2Q96IV6 333 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 SMOQ99835 787 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 MRPL17Q9NRX2 175 aaKnown RBP17.52■□□□□ 0.4
SHOX-201ENST00000334060 KRT82Q9NSB4 513 aa17.52■□□□□ 0.4
SHOX-201ENST00000334060 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
SHOX-201ENST00000334060 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.52■□□□□ 0.4
SHOX-201ENST00000334060 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.39
SHOX-201ENST00000334060 M0QYV0 167 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 ABL1P00519 1130 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 FECHP22830 423 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 RGS7P49802 495 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 ADGRE1Q14246 886 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 SGO2Q562F6 1265 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 PRPF38BQ5VTL8 546 aaKnown RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 SLC8B1Q6J4K2 584 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 NDRG1Q92597 394 aaKnown RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 KLHL5Q96PQ7 755 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 PANX2Q96RD6 677 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 BAG1Q99933 345 aaPredicted RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 MYO6Q9UM54 1294 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 PTPRDP23468 1912 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 SERPING1P05155 500 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 PAEPP09466 180 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 CDR2Q01850 454 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 PDE4CQ08493 712 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 ADCY1Q08828 1119 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 DUSP4Q13115 394 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms