RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 NOCTQ9UK39 431 aaKnown RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 KIAA1671Q9BY89 1806 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 TARSL2A2RTX5 802 aaKnown RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 UPP2O95045 317 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 SOD2P04179 222 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 KRT5P13647 590 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 NFE2Q16621 373 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 MAP9Q49MG5 647 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 LCLAT1Q6UWP7 414 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 WHAMMQ8TF30 809 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 EXOC4Q96A65 974 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 TMEM169Q96HH4 297 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 FUBP3Q96I24 572 aaKnown RBP eCLIP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 AGPAT1Q99943 283 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 SMYD3Q9H7B4 428 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 LCMT1Q9UIC8 334 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 MRPL42Q9Y6G3 142 aaKnown RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 DUSP10Q9Y6W6 482 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 NLRC5Q86WI3 1866 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 AKR1B10O60218 316 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TBC1D4O60343 1298 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 BMPR1AP36894 532 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 EIF4A3P38919 411 aaKnown RBP10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TSPY1Q01534 308 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TCEAL1Q15170 157 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 SLC18A3Q16572 532 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 SGO2Q562F6 1265 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 ZNF280DQ6N043 979 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 FAM171BQ6P995 826 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 GJB7Q6PEY0 223 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 SLC4A11Q8NBS3 891 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 C3orf58Q8NDZ4 430 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 SLC30A5Q8TAD4 765 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 EPS8L1Q8TE68 723 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 DDX1Q92499 740 aaKnown RBP10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TRIM11Q96F44 468 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 HNRNPABQ99729 332 aaKnown RBP10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TTPALQ9BTX7 342 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 SDCBP2Q9H190 292 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 CXXC1Q9P0U4 656 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-201ENST00000331239 CALCOCO1Q9P1Z2 691 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 AJAP1Q9UKB5 411 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-201ENST00000331239 JRKLQ9Y4A0 524 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 PCDHA13Q9Y5I0 950 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 IRAK3Q9Y616 596 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 A8MXQ7 604 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 CYP26A1O43174 497 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 WEE2P0C1S8 567 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TNFAIP3P21580 790 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 GNA15P30679 374 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 NDST1P52848 882 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 DSG1Q02413 1049 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 YWHAHQ04917 246 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-201ENST00000331239 HSP90B2PQ58FF3 399 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 OVOS1Q6IE37 1185 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 C4orf50Q6ZRC1 276 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 OR6B3Q8NGW1 331 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 ZNF606Q8WXB4 792 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 ALS2CR12Q96Q35 445 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 PNPLA8Q9NP80 782 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 COMMD8Q9NX08 183 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 PSD3Q9NYI0 1048 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 MSRAQ9UJ68 235 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 NENFQ9UMX5 172 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 SNX12Q9UMY4 172 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 CAPN6Q9Y6Q1 641 aa10.06□□□□□ -0.8
C11orf54-201ENST00000331239 TMEM265A0A087WTH1 108 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 LRRN2O75325 713 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 LINC00271P0C7V0 271 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 MYBL1P10243 752 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 MAGEA11P43364 429 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 ERVK-21P61565 698 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 SMAD3P84022 425 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 SPOUT1Q5T280 376 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 WSCD1Q658N2 575 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 TPGS2Q68CL5 300 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 KAT5Q92993 513 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 NOX5Q96PH1 765 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 MRPL45Q9BRJ2 306 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 ELOVL4Q9GZR5 314 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 ZCWPW1Q9H0M4 648 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 RXFP1Q9HBX9 757 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 ADAM21Q9UKJ8 722 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 BTNL10A8MVZ5 291 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 B4GALT3O60512 393 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 CLSTN1O94985 981 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 CYP1A1P04798 512 aaPredicted RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 RPL34P49207 117 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 GATMP50440 423 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 GYS2P54840 703 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 GSCP56915 257 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms