RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 NDUFB10O96000 172 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 YWHAQP27348 245 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 TTC39BQ5VTQ0 682 aaPredicted RBP10.98□□□□□ -0.65
CLN8-201ENST00000331222 LRRC8BQ6P9F7 803 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 SH3BP5LQ7L8J4 393 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 GATAD2AQ86YP4 633 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 ZNF669Q96BR6 464 aaPredicted RBP10.98□□□□□ -0.65
CLN8-201ENST00000331222 RBM15Q96T37 977 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■□ 23.2
CLN8-201ENST00000331222 CEP41Q9BYV8 373 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 KDM6BO15054 1643 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 PHF20L1A8MW92 1017 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 CYP19A1P11511 503 aaPredicted RBP10.98□□□□□ -0.65
CLN8-201ENST00000331222 SERPINB10P48595 397 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 SGSM1Q2NKQ1 1148 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 CAPRIN2Q6IMN6 1127 aaKnown RBP10.98□□□□□ -0.65
CLN8-201ENST00000331222 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLN8-201ENST00000331222 TBC1D16Q8TBP0 767 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 POP1Q99575 1024 aaKnown RBP10.98□□□□□ -0.65
CLN8-201ENST00000331222 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 FZD1Q9UP38 647 aa10.98□□□□□ -0.65
CLN8-201ENST00000331222 GPD1P21695 349 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 AKAP5P24588 427 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 KLRC2P26717 231 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 CASP4P49662 377 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 DMTNQ08495 405 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 NT5DC4Q86YG4 428 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 CCDC103Q8IW40 242 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 REXO4Q9GZR2 422 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 RHBGQ9H310 441 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 RNASEH1O60930 286 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 EYA4O95677 639 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TRIM65Q6PJ69 517 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TFAP2DQ7Z6R9 452 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TPD52L3Q96J77 140 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 GLT1D1Q96MS3 346 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TEX13BQ9BXU2 312 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 MTMR12Q9C0I1 747 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TUFT1Q9NNX1 390 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 GPRC5CQ9NQ84 441 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ACO1P21399 889 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 TRIM25Q14258 630 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 TMEM132BQ14DG7 1078 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 CLEC4GQ6UXB4 293 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TARS2Q9BW92 718 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 USP6P35125 1406 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 F5H5T6 163 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 TOMM70O94826 608 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 MT-CO1P00395 513 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 POLBP06746 335 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 TRPC4APQ8TEL6 797 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 RFFLQ8WZ73 363 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 CAAP1Q9H8G2 361 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ERAP1Q9NZ08 941 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 QRICH2Q9H0J4 1663 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 CBX4O00257 560 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 IGKV5-2P06315 115 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 KYAT1Q16773 422 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 SP8Q8IXZ3 490 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 INTS13Q9NVM9 706 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 STOML1Q9UBI4 398 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 HERC5Q9UII4 1024 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 VWA5AO00534 786 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ZNF682O95780 498 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 KRT20P35900 424 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 FMO5P49326 533 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 NUDT2P50583 147 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 CNTN1Q12860 1018 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 OVGP1Q12889 678 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 EZH2Q15910 746 aaKnown RBP10.97□□□□□ -0.65
CLN8-201ENST00000331222 SHC4Q6S5L8 630 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 DET1Q7L5Y6 550 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 FRMD5Q7Z6J6 570 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 SEPT1Q8WYJ6 367 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 DEFB129Q9H1M3 183 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 SMPD4Q9NXE4 827 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ADAM21Q9UKJ8 722 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
CLN8-201ENST00000331222 ATP7BP35670 1465 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 GTF2E2P29084 291 aaKnown RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 NPEPPSP55786 919 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 NLRP9Q7RTR0 991 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 TRMT11Q7Z4G4 463 aaKnown RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 CENPLQ8N0S6 344 aaPredicted RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 RNASE11Q8TAA1 199 aaKnown RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 OSBPL5Q9H0X9 879 aaPredicted RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 SLC38A7Q9NVC3 462 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 COPG1Q9Y678 874 aaKnown RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 CST8O60676 142 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 TGM2P21980 687 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms